Chloroplast molecular marker primers, and application thereof in early identification of seed sources of tobacco varieties
A technology of molecular markers and chloroplasts, which is applied in the determination/inspection of microorganisms, biochemical equipment and methods, DNA/RNA fragments, etc., can solve the problems affecting the double control policy of tobacco production, and achieve the effect of strict control
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Embodiment 1
[0030] See figure 1 Shown:
[0031] 1. Primers:
[0032] trnH1 / psbA1, trnH2 / psbA2, trnH3 / psbA3, trnH4 / psbA4
[0033] 2. Template DNA:
[0034] Conventional varieties: Honghua Dajinyuan (HD), K326,
[0035] CMS 1 (Sua-CMS): MS20 (Sua-CMS Honghua Dajinyuan, MS26 (Sua-CMSK326), CMS 2 (Gla-CMS): MS28 (Gla-CMSK326, MS29 (Gla-CMS Red Huada Jinyuan 3. (1) Reaction system: (25μL)
[0036] 2×Phanta max Buffer: 12.5 μL; trnH1 / psbA1, trnH2 / psbA2, trnH3 / psbA3, rnH4 / psbA4: 1 μL each; ddH2O: 8.5 μL; Template: 2 μL
[0037] (2) Gradient PCR reaction program:
[0038] 94°C, 2min; 94°C, 45s; 59°C, 30s; 72°C, 45s; 72°C, 4min;
[0039] Annealing: 59 degrees
[0040] figure 1 In the description:
[0041] The sample order is: HD, K326, MS20, MS26, MS28, MS29, water.
[0042] The primer sequence is: trnH1 / psbA1, trnH2 / psbA2, trnH3 / psbA3, trnH4 / psbA4 (the left and right arrows indicate the sequence of the primer pair).
[0043] Among them, the control of the last primer has no water.
...
Embodiment 2
[0047] See figure 2 Shown:
[0048] figure 2 In the description:
[0049] Sample order: HD, K326, MS28, MS29, MS20, MS26, water
[0050] Primer sequence: trnH1 / psbA1, trnH2 / psbA2, trnH3 / psbA3, trnH4 / psbA4
[0051] Enzyme: 2XPhanta max Buffer
[0052] Annealing: 59 degrees (35cyl), extension 72 degrees
[0053] Marker:100bp DNA ladder
[0054] Conclusion: The conventional species and the sterile line can be clearly distinguished by using the primers of the present invention, and there are obvious differences between them.
Embodiment 3
[0055] Embodiment three (the case of partial failure):
[0056] See image 3 Shown:
[0057] image 3 In the description:
[0058] Primer order:
[0059]
[0060] Sample order: Sua-CMS Yunyan 87, Sua-CMSK326, MS28, MS29, Honghua Dajinyuan, K326, Yunyan 87, Yunyan 97, Yunyan 116, China Tobacco 100.
[0061] Conclusion: Using the primer pair No. 1-8 can not clearly distinguish the conventional species and the sterile line, and the difference is not obvious.
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