The invention relates to a ship for comprehensively cleaning crude oil leaked on water. The ship comprises a connection ship main body, a crude oil adsorption device, air separation devices, primary swirler separation devices, and secondary capillary electrophoresis separation devices. The connection ship main body comprises a left ship body and a right ship body, an oil storage cabin and a machinery cabin. Oil containment booms are arranged on the front parts of the ship body respectively; the crude oil adsorption device comprises a floating oil adsorption head, an oil conveying pipe and an oil pump. Each air separation device comprises a main tank body, a demulsifier feeding port, a top air release valve, a liquid level sensor, a crude oil and seawater mixed liquid inlet, a secondary separation liquid inlet, and a mixed liquid outlet. Each primary swirler separation device comprises a primary swirler, a primary swirler input pump, a secondary swirler, and a secondary swirler input pump. Each secondary capillary electrophoresis separation device comprises a high-pressure demulsification electric field and a capillary electrophoresis separation device. The ship has the advantages of high working performance, safety, and environment-friendliness; and mechanization operation does not have any polluted and harmful effect on a human body.