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Efficient extraction method for river crab genome DNA after long-term storage in alcohol

A long-term preservation and genome technology, applied in the field of crab genome DNA, can solve the problems of slowness, muscle tissue corruption, difficulty in DNA extraction, etc., and achieve the effect of high quality, effective extraction and sufficient quantity

Inactive Publication Date: 2014-09-10
SHANGHAI OCEAN UNIV
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  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

Compared with other aquatic organisms preserved with alcohol, river crabs belong to the particularity of lower crustaceans. The carapace has a certain protective effect on muscle tissue, which makes the process of alcohol infiltrating into muscle tissue relatively slow, so that muscle tissue can be recovered in a short period of time. There is a certain degree of corruption without preservation, which affects the integrity of DNA preservation, and finally makes subsequent DNA extraction difficult

Method used

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  • Efficient extraction method for river crab genome DNA after long-term storage in alcohol
  • Efficient extraction method for river crab genome DNA after long-term storage in alcohol

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Experimental program
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Effect test

specific Embodiment approach

[0027] 1. The organization adopts

[0028] 1. Cut a little muscle on the second leg of the river crab preserved in alcohol, and the muscle needs to be cut longitudinally during the cutting process.

[0029] 2. After the cut muscle was dried in an oven at 37°C with alcohol (1 hour), the muscle was cut into powder with small scissors. (This step is one of the key steps, and the time should not exceed 1 hour. If it is too long, it will cause excessive drying and affect DNA extraction.)

[0030] 2. DNA extraction

[0031] 1. Preparation of lysis buffer: The composition and concentration of the lysis buffer are: STE (10mmol / L EDTA, 0.1mol / L NaCl, 0.01M Tris-Cl), 10% SDS, 20mg / mL protease K .

[0032] 2. Digestion: Add 400uL of STE, 100uL of SDS (10%), and 20uL of protease to the centrifuge tube K (20mg / mL), vortex and mix for 15 seconds, briefly centrifuge and place in a 56°C water bath for about 20 hours until the tissue is completely digested and the solution becomes cl...

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Abstract

The invention discloses a method for extracting the river crab genome DNA after long-term storage in alcohol, which comprises the following steps: (1) tissue fetching: clipping a little second pereiopod muscle of Eriocheir sinensis stored in alcohol, and drying the alcohol; and (2) extraction of genome DNA: preparing a lysis buffer, performing water-bath digestion and centrifuging; adding a saturated NaCl solution and chloroform and centrifuging; adding chloroform and centrifuging; adding isopropyl alcohol, and centrifuging to precipitate DNA; washing, centrifuging and drying; and adding deionized water or TE solution and storing. The method disclosed by the invention solves the difficulty in the DNA extraction of Eriocheir sinensis after long-term storage in alcohol, and conveniently and effectively extracts the river crab DNA; the extracted DNA has enough amount and high quality and is barely polluted by proteins and can be applied to subsequent multiple kinds of molecular biological analysis so as to provide a technological means for the genetic diversity research, germplasm protection and resource utilization of the river crabs; the method is of important scientific significance and practical value.

Description

technical field [0001] The invention relates to a simple, rapid and high-quality method for extracting genome DNA of crabs preserved in alcohol. Background technique [0002] River crab is the general term for freshwater mitten crabs in my country, including Chinese mitten crabs ( Eriocheir sinensis ), Japanese mitten crab ( Eriocheir japanicus ) and Hepu mitten crab ( Eriocheir hepunensis ). They all belong to Arthropoda, Crustacca, Decapo, Grapsidae, mitten crab ( Eriocheir ). Eriocheir sinensis is a unique aquatic economic animal in my country. It is widely distributed in the Liaohe River, Yangtze River, Oujiang River, Minjiang River and other water systems. In addition, it is also widely distributed in Europe and other places. Japanese mitten crabs are mainly distributed in mainland Japan, the Korean Peninsula, and Vladivostok in Russia. Hepu mitten crabs are distributed in the Nanliujiang water system (such as Hepu County) and the Pearl River water system in Gu...

Claims

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Application Information

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IPC IPC(8): C12N15/10
Inventor 王成辉吴廉
Owner SHANGHAI OCEAN UNIV
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