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Interactive analysis system and method for transcriptome project with reference genome based on cloud computing platform

A technology that refers to the genome and cloud computing platform. It is applied in the field of interactive analysis system, which can solve the problems of low efficiency of business process and inability to complete big data processing and analysis, and achieve the effect of improving the level of comprehensive management and comprehensive content of interactive analysis.

Inactive Publication Date: 2018-12-25
上海桑格信息技术有限公司
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Problems solved by technology

[0007] Aiming at the deficiencies in the above-mentioned technologies, the present invention provides an interactive analysis system and method for transcriptome projects with reference genomes based on a cloud computing platform to solve the problems of large data processing and analysis that cannot be completed by personal computers and workstations. The problem of low efficiency of the existing manual business process

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  • Interactive analysis system and method for transcriptome project with reference genome based on cloud computing platform
  • Interactive analysis system and method for transcriptome project with reference genome based on cloud computing platform
  • Interactive analysis system and method for transcriptome project with reference genome based on cloud computing platform

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Embodiment Construction

[0039] In order to describe the present invention in more detail, the present invention will be further elaborated below in conjunction with the accompanying drawings.

[0040] see figure 1 , the interactive analysis system system of the transcriptome project with reference genome based on the cloud computing platform of the present invention, including

[0041] The project management module 10 is used to view, edit and manage the detailed information of the project;

[0042] The basic analysis task submission module 11 is used to set the basic parameters of the task, perform calculation analysis after submission, and integrate and distribute the output analysis results and original data to the corresponding project files according to the preset format;

[0043] The interactive result analysis module 12 is used to further optimize the analysis results according to the individual needs of users, and present the results visually, including advanced bioinformatics analysis and per...

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Abstract

The invention discloses an interactive analysis system and a method of a transcriptome project with a reference genome based on a cloud computing platform. The system comprises a project management module for viewing, editing and managing the detailed information of the project. A basic analysis task submitting module is used for setting parameters of a task, performing operation analysis after submitting, and integrating the output analysis result and the original data to generate a project file according to a preset format; and an interactive result analysis module for further optimizing theanalysis results according to the user's personalized requirements and visually presenting the results. The system and method of the present invention provide a highly integrated data analysis platform by means of cloud computing technology, laying a good foundation for basic analysis, advanced analysis and personalized analysis of a transcriptome project with a reference genome.

Description

technical field [0001] The invention relates to the technical field of biological information analysis, in particular to an interactive analysis system and method for a transcriptome project with a reference genome based on a cloud computing platform. Background technique [0002] Transcriptome refers to the collection of all RNAs transcribed in a certain species, tissue or cell in a specific state, including mRNA and non-coding RNA. Transcriptome is the link between the genome that bears genetic material and the proteome that performs biological functions. The regulation of transcription level is the most important and widely studied regulation method. Compared with the study of genome level, transcriptome research can give more efficient results. More precise research information. [0003] Although high-throughput sequencing technology has made great progress compared with traditional sequencing technology, deciphering animal and plant genomes still faces great difficulti...

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): G06F19/18G06F19/28
Inventor 任一余果郭权韩畅史彩萍仝颜丽刘彬旭石今曾静周玄董亚晨
Owner 上海桑格信息技术有限公司
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