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Primers and probes for detecting cow SLC35A3 gene V180F mutation

A probe and gene technology, applied in the field of TaqMan MGB probes, can solve the problems of detection results being easily affected by experimental conditions, cumbersome steps, and low sensitivity, and achieve reliable detection results, simple workflow, and high sensitivity.

Inactive Publication Date: 2011-04-06
CHINA AGRI UNIV
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  • Summary
  • Abstract
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  • Application Information

AI Technical Summary

Problems solved by technology

[0010] The purpose of the present invention is to overcome the cumbersome steps of existing CVM genetic defect gene detection by introducing restriction site polymerase chain reaction (PIRA-PCR) and polymerase chain reaction-single-strand conformation polymorphism (SSCP) method, Time-consuming, low sensitivity, detection results are easily affected by experimental conditions and other shortcomings, provide a suitable primer and specific TaqMan MGB probe that can accurately and efficiently detect the V180F mutation site of the SLC35A3 gene, using these primers and probes, Using real-time fluorescence quantitative PCR technology, it can quickly and sensitively detect the genotype of the SLC35A3 V180F mutation site of the bovine to be tested, so as to accurately screen the carriers of CVM genetic defects

Method used

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  • Primers and probes for detecting cow SLC35A3 gene V180F mutation
  • Primers and probes for detecting cow SLC35A3 gene V180F mutation
  • Primers and probes for detecting cow SLC35A3 gene V180F mutation

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Experimental program
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Effect test

Embodiment

[0037] 1. DNA extraction

[0038] (1) DNA extraction from bovine blood

[0039] Genomic DNA was extracted from blood clots using the DP318 kit from Tiangen Biochemical Biotechnology Co., Ltd. The specific steps are as follows:

[0040] 1) Take out the sample, after melting, cut 200μL into a 2mL centrifuge tube;

[0041] 2) Add 600 μL cell lysate CL and shake well;

[0042] 3) Centrifuge at 10000rpm for 1min, discard the dark red supernatant;

[0043] 4) Repeat 2) and 3) once;

[0044] 5) Add 200 μL buffer GS, and fully suspend blood clot particles with a vortexer;

[0045] 6) Add 20 μL proteinase K, 220 μL buffer GB, shake well;

[0046] 7) Digest in an oven at 56°C for more than 3 hours. In the early stage of digestion, invert and mix several times until the solution becomes clear and free of blood clot particles;

[0047] 8) Add 200 μL of absolute ethanol, shake gently to mix, transfer to the adsorption column, centrifuge at 12000rpm for 30s, and discard the dark green...

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Abstract

The invention provides primers and specific TaqMan MGB probes for accurately and efficiently detecting SLC35A3 gene V180F mutation bits. When the primers and the probes are used, and the real-time fluorescence quantitative PCR (Polymerase Chain Reaction) technology is utilized, the gene type of the cow SLC35A3 gene V180F mutation bits to be detected can be fast and sensitively detected, so that the cow CVM (Complex Vertebral Malformation) hereditary defect carriers can be accurately sieved. Compared with the traditional detection technology, the primers and the probes have various advantages including high detection speed, high sensitivity and high automation degree, in addition, the types can be judged through one PCR, the whole reaction process is carried out in a sealed tube, and the cross contamination is reduced.

Description

technical field [0001] The invention relates to the field of biotechnology, in particular to primers and specific TaqMan MGB probes for detecting bovine SLC35A3 gene V180F mutation. Background technique [0002] Genetic defects refer to structural or functional changes in the genetic material in germ cells or fertilized eggs, resulting in abnormal anatomical structures or damage to physiological functions in the developed individual. The frequency of inherited disease genes is higher in dairy cow populations, which is associated with high-intensity selection of dairy cows. After decades of high-intensity breeding of dairy cows in the world, the blood relationship of the breeding bulls is getting closer and closer, which increases the risk of rapid spread of harmful genes. Once the breeding bull has a certain genetic defect, through artificial insemination technology, the genetic defect Genes spread rapidly through the herd. [0003] In recent years, my country has imported...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/68C12N15/11G01N21/64
Inventor 张沅范学华张毅孙东晓王雅春俞英张胜利
Owner CHINA AGRI UNIV
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