Real-time fluorescent quantitation PCR (polymerase chain reaction) parting detection kit for human herpesvirus-6

A technology of real-time fluorescence quantification and detection kits, which is applied to the determination/inspection of microorganisms, biochemical equipment and methods, etc., and can solve the problems of low antibody specificity, difficult typing, and long time

Inactive Publication Date: 2014-05-28
ZHEJIANG UNIV
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0003] Traditional herpes virus detection methods mainly include virus isolation and culture and serological detection. The former was once the "gold standard" for the diagnosis of herpes virus, but it takes a long time (3-30 days) and has low sensitivity (especially after antiviral drug treatment). ), typing difficulties and other defects; the latter is divided into direct antigen detection method and antibody indirect d...

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  • Real-time fluorescent quantitation PCR (polymerase chain reaction) parting detection kit for human herpesvirus-6
  • Real-time fluorescent quantitation PCR (polymerase chain reaction) parting detection kit for human herpesvirus-6

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Embodiment 1

[0027] see figure 1 , the human herpesvirus type 6 real-time fluorescent quantitative PCR typing detection kit provided by the present invention consists of quantitative PCR reaction solution 1, HHV-6A standard product 2, HHV-6B standard product 3, HHV-6A positive control product 4, HHV -6B consists of 5 positive control substances, 6 negative control substances, 7 instructions and 8 boxes.

[0028] The quantitative PCR reaction solution contains PCR buffer, MgCl 2 , dNTPs, thermostable DNA polymerase, upstream amplification primer, downstream amplification primer, HHV-6A fluorescent probe and HHV-6B fluorescent probe.

[0029] The primer sequences for PCR amplification are:

[0030]Upstream amplification primer (SEQ ID No: 1): 5'-CCGTGAAGTTGGGGGATGAG-3';

[0031] Downstream amplification primer (SEQ ID No: 2): 5'-CAGAAGCAGCAATCGCAACAC-3';

[0032] Fluorescent probes and fluorescent markers for the detection of each herpesvirus are:

[0033] HHV-6A fluorescent probe (SEQ ...

Embodiment 2

[0039] Example 2 Sensitivity and specificity test of human herpesvirus type 6 real-time fluorescent quantitative PCR typing detection kit

[0040] (1) Materials:

[0041] The selected pathogenic microorganisms include: experimental group: HHV-6B (GS strain) provided by the Microbiology Teaching and Research Group of Nanjing Medical University, HHV-6A screened from clinical blood samples by Children's Hospital Affiliated to Zhejiang University; control group: Staphylococcus aureus, Escherichia coli Bacteria, Hepatitis B virus, Cryptococcus neoformans, Candida albicans and human genome were provided by the Bacteria Room, Virus Room and Gene Amplification Room of Children's Hospital Affiliated to Zhejiang University.

[0042] (2) Design and synthesis of primers and probes:

[0043] Conduct bioinformatics analysis on the conserved region sequences of HHV-6A and HHV-6B, design and screen PCR amplification primers and specific fluorescent probes, and entrust Shanghai Sangon Bio...

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Abstract

The invention provides a real-time fluorescent quantitation PCR (polymerase chain reaction) parting detection kit for human herpesvirus-6 (HHV-6). The real-time fluorescent quantitation PCR parting detection kit consists of quantitation PCR reaction liquid, an HHV-6A standard substance, an HHV-6B standard substance, an HHV-6A positive reference substance, an HHV-6B positive reference substance, a negative reference substance, a specification and a kit body, wherein the quantitation PCR reaction liquid contains a PCR buffer solution, MgCl2, dNTPs, heat-resistant DNA polymerase, an upstream amplification primer, a downstream amplification primer, an HHV-6A fluorescent probe and an HHV-6B fluorescent probe. By the adoption of a real-time fluorescent quantitation PCR technology and a double-color fluorescent probe, the kit disclosed by the invention can detect two subtypes of the HHV-6 by a one-step method; the HHV-6A and HHV-6B in the sample can be simultaneously parted; a positive virus subtype can be accurately quantified in real time; the urgent need of early and acute parting diagnosis on the HHV-6 infection can be met; a basis is supplied to epidemiological investigation and targeted treatment on the HHV-6 infection.

Description

technical field [0001] The invention belongs to the field of biological technology, and relates to a fluorescent quantitative PCR detection kit, in particular to a dual-probe real-time fluorescent quantitative PCR detection and typing of human herpesvirus 6 (human herpesvirus 6, HHV-6) diagnostic kit, which can simultaneously type and quantify the two subtypes of HHV-6, HHV-6A and HHV-6B. Background technique [0002] Herpesviridae is a group of medium-sized, enveloped DNA viruses, more than 100 species have been discovered. Herpesviruses known to be associated with human disease include herpes simplex virus types 1 and 2 (HSV-1, HSV-2), varicella-zoster virus (VZV), Epstein-Marr virus (EBV), human giant Cytovirus (HCMV), human herpesvirus types 6, 7 and 8 (HHV-6, HHV-7, HHV-8). Among them, HHV-6 belongs to the β-herpesvirus subfamily and can be divided into two subtypes, 6A and 6B. It is a relatively newly discovered human herpesvirus and is the pathogen of acute eruption...

Claims

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Application Information

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IPC IPC(8): C12Q1/70C12Q1/68
CPCC12Q1/686C12Q1/70C12Q2531/113C12Q2561/113C12Q2563/107
Inventor 尚世强杜立中舒强陶然李伟
Owner ZHEJIANG UNIV
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