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Integrated digital nucleic acid amplification chip based on micro-droplets as well as use method and application of integrated digital nucleic acid amplification chip

A micro-droplet and nucleic acid technology, applied in biochemical equipment and methods, microbial measurement/inspection, specific-purpose bioreactor/fermenter, etc., can solve the problem of reducing the accuracy and reliability of digital PCR, aerosol crossover, etc. Pollution, affecting detection accuracy and other issues, to achieve the effect of improving detection efficiency and detection accuracy, promoting rapid development, and simple chip structure

Pending Publication Date: 2021-03-26
SUZHOU DIYINAN BIOTECHNOLOGY CO LTD
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0007] Among the existing commercialized digital PCR chips, most of them use one chip to generate droplets, transfer them to the PCR tube for amplification, and then transfer them to another detection chip for fluorescence detection, that is, the entire reaction is performed by "generated droplets-PCR Heating reaction-detection consists of three parts, and the operation is relatively cumbersome. At the same time, in the process of droplet transfer, there are droplet breakage, incomplete transfer, and aerosol cross-contamination, which reduces the accuracy and reliability of digital PCR.
Currently, there are relatively few integrated digital nucleic acid amplification chips (including digital PCR and digital isothermal amplification) based on micro-droplets. Thus affecting the detection accuracy

Method used

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Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0052] This embodiment provides an integrated digital nucleic acid amplification chip based on micro-droplets, the structure of which is as follows: figure 1 Shown:

[0053] The integrated digital nucleic acid amplification chip includes an upper cover 1 and a bottom plate 2; the upper cover includes an oil inlet 3, an injection port 4 and an exhaust port 5 in sequence from left to right;

[0054] The bottom plate is divided into a droplet generation area and a droplet storage area, wherein the droplet generation area of ​​the bottom plate includes: an oil inlet flow channel 6 and an injection port flow channel 7, which are connected to the oil inlet and the injection port respectively. connected, and the flow channel of the injection port is set as a serpentine flow channel structure;

[0055] The intersection of the oil inlet flow channel 6 and the injection port flow channel 7 is a cross channel, and the micro-droplets are generated at the intersection, and at the same tim...

Embodiment 2

[0061] This embodiment provides a method for using a micro-droplet-based integrated digital nucleic acid amplification chip. Specifically include the following steps:

[0062] (1) First, for the target nucleic acid sample, prepare a premix solution for nucleic acid amplification reaction;

[0063] (2) Mineral oil and premixed solution are passed into the chip from the oil inlet and sample inlet respectively through a precision syringe pump; the mineral oil and premixed solution produce water-in-oil micro-droplets at the "cross" intersection channel;

[0064] (3) and collect the droplets in the collection chamber channel under the continuous pressure of the syringe pump;

[0065] (4) After the droplet is formed, seal the oil inlet, sample inlet and exhaust hole with sealant, and place the chip on the heating platform to complete the nucleic acid amplification reaction.

[0066] (5) After the reaction is over, use the LED light source to excite the sample after the amplificati...

Embodiment 3

[0068] In this example, the integrated digital nucleic acid amplification chip provided in Example 1 was used to generate micro-droplets, and a loop-mediated isothermal amplification (LAMP) reaction was performed.

[0069] In this embodiment, a dual-channel syringe pump is selected as the driving device for the sample, and the two channels are respectively connected with mineral oil and LAMP amplification premix, and are respectively connected to the oil inlet and the sample inlet;

[0070] Place the chip under the optical microscope platform to observe the droplet formation;

[0071] After connecting the device, adjust the parameters of the syringe pump, set the flow rate of the oil phase to 3000 microliters / hour, and set the flow rate of the water phase to 1000 microliters / hour;

[0072] Mineral oil and LAMP amplification master mix are passed into the chip from the oil inlet and sample inlet through a precision syringe pump, and it can be observed that droplets with good un...

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Abstract

The invention provides an integrated digital nucleic acid amplification chip based on micro-droplets as well as a use method and an application of the integrated digital nucleic acid amplification chip. The integrated digital nucleic acid amplification chip comprises an upper cover and a bottom plate. The upper cover comprises an oil inlet, a sample inlet and an exhaust port. The bottom plate comprises a droplet generation area and a droplet storage area, wherein the droplet generation area comprises an oil inlet flow channel and a sample inlet flow channel; the oil inlet flow channel is connected with the sample inlet, the sample inlet flow channel is connected with the sample inlet, the intersection of the oil inlet flow channel and the sample inlet flow channel is a cross-shaped channel, and micro-droplets are generated at the intersection of the oil inlet flow channel and the sample inlet flow channel; the droplet storage area comprises a collection cavity flow channel and a droplet storage cavity; the collection cavity flow channel is connected with the cross-shaped channel, and the droplet storage cavity is connected with the collection cavity flow channel and the exhaust port. The processes of droplet generation, nucleic acid amplification, detection and the like can be completed on the chip, so that the detection efficiency and the detection accuracy are improved, and rapid development of an integrated digital nucleic acid amplification technology based on micro-droplets is promoted.

Description

technical field [0001] The invention belongs to the field of nucleic acid detection, and in particular relates to an integrated digital nucleic acid amplification chip based on micro-droplets and its use method and application. Background technique [0002] At present, in vitro diagnostic technology using nucleic acid as a detection marker has received more and more attention, and has been widely used in clinical diagnosis, food safety, public health and other fields. Especially for the recent global outbreak of novel coronavirus pneumonia (COVID-19) caused by a new type of coronavirus infection, nucleic acid testing plays an important role in differential diagnosis, clinical guidance, discharge screening, etc. powerful means. [0003] In addition, for the emerging real-time detection application scenarios that do not depend on the central laboratory, the development of portable, low-cost, and integrated nucleic acid detection devices is of great significance, and it will h...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12M1/34C12M1/00C12Q1/6851
CPCC12Q1/6851C12Q2563/159C12Q2563/107
Inventor 徐峰季京成任玉林李泽东
Owner SUZHOU DIYINAN BIOTECHNOLOGY CO LTD
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