Peripheral blood TCR marker of diffuse large B-cell lymphoma as well as detection kit and application of peripheral blood TCR marker
A marker, lymphoma technology, applied in the field of genetic engineering, can solve the problems of judging disease, patient physical injury, increasing patient burden, etc., achieving high specificity and accuracy, reducing detection costs, and low labor costs.
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Embodiment 1
[0044] Example 1 Obtaining Diffuse Large B-cell Lymphoma TCR Marker CDR3 Sequence Set Through Immunogram Analysis
[0045] 1. Sampling and immune map analysis (for the method, refer to the patent with application number 201910300069.9)
[0046] Collect 1301 control groups (including healthy people and patients with non-tumor diseases, 1300 people for model building, 1 healthy person for verification), 41 diffuse large B-cell lymphoma patients (40 people for model building, 1 person For verification) and peripheral blood (10mL per person) of a subject with unknown health status, the antigenic determinant 3 (CDR3) amino acid sequence of the TCR of the subject and the control group was obtained by high-throughput sequencing, ensuring that each The total number of CDR3 sequences of functional TCR in the sample should not be less than 25,000;
[0047] 2. Perform random non-replacement sampling on the sequences of samples whose total number of CDR3 sequences of each functional TCR ...
Embodiment 2
[0053] Example 2 Verification of the specificity of the diffuse large B-cell lymphoma TCR marker CDR3 sequence set
[0054] 1. Sampling and immune map analysis (for the method, refer to the patent with application number 201910300069.9)
[0055] The peripheral blood (10 mL per person) of 577 tumor patients with non-diffuse large B-cell lymphoma and 7 subjects with unknown health status was collected, and the epitope 3 of TCR of the subjects and the control group was obtained by high-throughput sequencing (CDR3) amino acid sequence, to ensure that the total number of functional TCR CDR3 sequences of each sample is not less than 25,000; random non-replacement sampling is performed on the sequences of samples whose total number of functional TCR CDR3 sequences is higher than 30,000, so that The total number of CDR3 sequences in this sample is 30,000. So far, the total number of functional TCR CDR3 sequences contained in all samples is 25,000-30,000.
[0056] 2. Randomly select ...
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