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Gene panel for nervous system tumor detection, kit and application thereof

A nervous system and kit technology, applied in genomics, microbial measurement/inspection, DNA/RNA fragments, etc., can solve problems such as reporting of high-throughput sequencing detection methods, and achieve the effect of reducing costs

Pending Publication Date: 2021-12-03
FUDAN UNIV SHANGHAI CANCER CENT
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0004] At present, the diagnostic methods for nervous system tumors are mainly based on the traditional positioning and characterization of clinical symptoms and signs of patients, as well as special examination items, such as cerebrospinal fluid examination, traditional X-ray examination and CT scan, etc., and have not combined high-throughput sequencing. The detection method report

Method used

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  • Gene panel for nervous system tumor detection, kit and application thereof
  • Gene panel for nervous system tumor detection, kit and application thereof
  • Gene panel for nervous system tumor detection, kit and application thereof

Examples

Experimental program
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Effect test

Embodiment

[0038] 1. Take a patient's blood sample to extract DNA, and use the QIAsymphony automated platform to extract and purify the DNA.

[0039] 2. Fragment screening

[0040] 2.1 Quantify the DNA concentration of the sample first. If the total amount of 20μl reaches 30ng or more, the normal process, if it does not reach 30ng, add more, concentrate (the maximum volume can be 30μl, and the water will decrease accordingly) and other methods to get it to 20-30ng, and continue the experiment. , if the concentration is too low, such as the initial concentration of about 0.5, then at least 10ng of DNA should be ensured after concentration and addition.

[0041] 2.2 Take the AMPure XP magnetic beads out of the refrigerator and equilibrate to room temperature half an hour in advance; prepare fresh 80% EtOH in advance (take 40ml of absolute ethanol and add 10ml of nucleic acid-free water NFW).

[0042] 2.3 Shake the AMPure XP magnetic beads equilibrated to room temperature for no less than ...

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PUM

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Abstract

The invention belongs to the technical field of nervous system tumor multi-gene detection, and discloses a gene panel for detecting nervous system tumors, important exon regions and partial intron regions of 454 genes are enriched by using a biological probe hybridization method, and the detection and analysis contents comprise somatic mutation, embryonic mutation, copy number variation, fusion gene and other variation, which aims to achieve accurate detection. The multi-gene screening list is made into a probe, high-risk genes are detected in a targeted mode through hybridization capture sequencing, gene mutation with guiding significance on diagnosis and treatment can be detected more efficiently, the gene detection cost of patients and the operation difficulty of experimenters can be reduced, meanwhile, some tumor patients can be possibly helped to participate in clinical tests, and important guiding significance is provided for clinical diagnosis and discovery of target spots of targeted therapy.

Description

technical field [0001] The invention belongs to the technical field of multigene detection of nervous system tumors, and relates to a gene panel, a kit and an application thereof based on nervous system cancer detection. Background technique [0002] Nervous system includes central nervous system and peripheral nervous system. Nervous system tumors include primary intracranial tumors and gliomas, most of which are primary intracranial tumors. Symptoms caused by intracranial tumors include local neurological symptoms caused by tumor compression or destruction of surrounding brain tissue, and symptoms of increased intracranial pressure caused by intracranial space-occupying lesions. [0003] With the development of high-throughput sequencing and the deepening of gene research, the relationship between cancer and gene variation has been continuously confirmed, which has played an important guiding role in the design of targeted drugs and new treatment methods. In order to furt...

Claims

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Application Information

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IPC IPC(8): C12Q1/6886C12Q1/6869C12Q1/6837C12N15/11G16B20/50G16B50/00
CPCC12Q1/6886C12Q1/6869C12Q1/6837G16B20/50G16B50/00C12Q2600/156C12Q2535/122C12Q2565/501
Inventor 曹依群李良东冯明陶邵志敏胡欣黄薇施锦绣裴雨晨王云锦张国亮牛珍珍
Owner FUDAN UNIV SHANGHAI CANCER CENT
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