Specific primer and probe for real-time fluorescent PCR detection of enterococcus faecalis
A technology of Enterococcus faecalis and real-time fluorescence is applied in the field of microbial detection, which can solve the problems of fuzzy results and unsatisfactory results.
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Embodiment 1
[0045] The preparation of embodiment 1EF-16S gene standard product
[0046] To establish a real-time fluorescent quantitative PCR method, the external standard required by the method must first be prepared. The standard should contain highly conserved and specific sequences, and high specificity of the reaction must be ensured. The 16SRNA gene is highly conserved. In this study, the 16SRNA gene of Enterococcus faecalis was used as the target sequence. This example mainly uses PCR technology to amplify the 16S RNA gene of Enterococcus faecalis, and uses gene recombination technology to connect it to the plasmid vector pMD18-T to construct the recombinant plasmid pMD18-T-EF-16S, and carry out corresponding PCR identification and sequencing Identification, and finally quantified as a standard for the method to be established, laying the foundation for the next method and evaluation.
[0047] 1. Preparation of template DNA
[0048] Extract the genomic DNA of Enterococcus faecal...
Embodiment 2
[0121] Example 2 Establishment of real-time fluorescent quantitative PCR detection method for Enterococcus faecalis
[0122] 1. Design and synthesis of specific primers and probes
[0123] Taking the conserved fragment of the 16SRNA gene of Enterococcus faecalis selected above as the target, a set of real-time fluorescent quantitative PCR primers and probes were designed using Primerexpress3 software, PrimerPremier5 software and Oligo7 software.
[0124] As the core of the present invention, a group of primers and probe nucleotide sequences for the detection of Enterococcus faecalis real-time fluorescent PCR are as follows:
[0125] Upstream primer: EF-16S-140F5'-TTCGCACCAGGAGATAAA-3'
[0126] Downstream primer: EF-16S-252R5'-GCTGAATTGGCAGAGGAC-3'
[0127] Probe: EF-16S-168P5'-TTTTTCCCAGTTCACTGCCG-3'
[0128] The fluorescent reporter group at the 5' end of the probe is FAM, and the fluorescent quencher group TAMRA is labeled at the 3' end. At the same time, other fluorescen...
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