Biological information handling

A biological sub- and biological sequence technology, which is applied in the field of retrieving and/or associating the biological information, can solve problems such as not allowing data to be combed, and achieve the effects of fast and deterministic sequence generation, reducing errors, and improving speed
CN113454726APending Publication Date: 2021-09-28生物海滩公司
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Patent Information

Authority / Receiving Office
CN · China
Patent Type
Applications(China)
Current Assignee / Owner
生物海滩公司
Publication Date
2021-09-28

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Abstract

In a first aspect, the present invention relates to a computer-implemented method for obtaining information on a biological entity which is based on at least one biological sequence, comprising: (a) providing a repository of fingerprint data strings for a biological sequence database, each fingerprint data string representing a characteristic biological subsequence made up of sequence units, each characteristic biological subsequence having in the biological sequence database a combinatory number which is lower than the total number of different sequence units available thereto, the combinatory number of a biological subsequence being defined as the number of different sequence units that appear in the biological sequence database as a consecutive sequence unit of the biological subsequence; (b) determining one or more fingerprint data strings which are representative for the biological entity; (c) searching a repository comprising information associated with the fingerprint data strings for information associated with the one or more representative fingerprint data strings; and (d) processing the information.
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Description

technical field

[0001] The present invention relates to the processing of biological information, and more particularly to retrieving and / or correlating said biological information. Background technique

[0002] Biological sequencing has advanced at an astonishing pace over the past few decades, making possible the Human Genome Project, which achieved the complete sequencing of the human genome more than 15 years ago. To drive this development, numerous technological advances are required, from advances in sample preparation and sequencing methods to data acquisition, processing, and analysis. At the same time, new scientific fields have emerged and developed, including genomics, proteomics, and bioinformatics.

[0003] Driven by the emphasis on data acquisition in the post-genomic era, this development has led to the accumulation of large amounts of biological (e.g., sequence) data. However, the ability to organize, analyze and interpret this sequence to extract biologica...

Claims

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