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Analytical biochemistry system with robotically carried bioarray

a biochemistry and robotic technology, applied in the direction of material analysis, burettes/pipettes, sequential/parallax process reactions, etc., can solve the problems of multiple analytes detection, limited sample throughput of pipette tips, etc., and achieve rapid and easy sample assessment, simple, adaptable

Inactive Publication Date: 2006-03-02
AFFYMETRIX INC
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Benefits of technology

The present invention is an analytical biochemistry system that automates the analysis of samples for the presence of target biomolecules. The system includes a solid substrate that is supported by a holder and carried by a manipulator. The substrate has a plurality of distinct reactants immobilized on its surface at known locations, forming an array. The substrate is in contact with a sample, and the reactants bind with the target biomolecules in the sample to form immobilized biomolecule complexes. The complexes are then detected using a probe, such as a fluorescence detector. The invention provides a faster and more efficient method for analyzing samples for target biomolecules than traditional methods. The substrate can be created on a separate member or directly on the holder. The technical effects of the invention include improved automation and efficiency in analyzing samples for target biomolecules.

Problems solved by technology

These pipette tips are limited in their sample throughput because they house only a single ligand reagent and thus preclude the detection of multiple analytes within a sample.

Method used

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  • Analytical biochemistry system with robotically carried bioarray
  • Analytical biochemistry system with robotically carried bioarray
  • Analytical biochemistry system with robotically carried bioarray

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Embodiment Construction

[0045] With reference to FIG. 1, a system 10 utilizing a movable bioarray is shown. Specifically, a robotic arm 12 carries a holder 20 which fits and transports bioarray 11, first to the sample, which may be in well 17 of micro-titer plate 15 or in vial 16 of rack 14. Although a robotic arm is one form of manipulator which may be used, other simpler manipulators may be employed, such as mechanical movements. A preferred type of manipulator device is the Biomek, a trademark for an instrument of Beckman Instruments, Inc. As will be seen below, the substrate portion of bioarray 11 is mounted in a holder having a support region which may be quite small. After the bioarray and the sample have had a sufficient incubation or reaction time for interaction of reactants on the substrate and any target biomolecules which may be present within the sample, the robotic arm 12 moves the substrate 11 to the detection assembly 18 of instrument 10.

[0046] In FIG. 1, optical detection station 18 is pr...

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Abstract

An analytical biochemistry system featuring a substrate with reactants immobilized thereon at fixed, known locations, a holder supporting the substrate and a manipulator for transporting the holder to a fixed sample and to an inspection station. The reactants are binding agents for a target biomolecule in a sample which forms a bound substance having a detectable characteristic. The holder may be a standard pipettor, optionally carried by a robot arm or hand as the manipulator to contact the sample for detection of the presence of target biomolecules within the sample. In one embodiment, the holder is a pipette tip within which the substrate is housed, or it may be a pipette adapter which bears the substrate and fits within the sample wells of a standard microtiter plate. After appropriate incubation, the substrate and holder may be moved from contact with the sample, and the substrate may be exposed to any necessary development steps before being moved by the manipulator to a location for probing, such as by a beam. Probing of the substrate is performed to identify binding or complexing of target biomolecules of the sample with the reactants immobilized on the substrate, and may be accomplished via fluorescence detection, light scattering, autoradiography, or some other detection method.

Description

TECHNICAL FIELD [0001] This invention relates to a system and methods for detecting the presence of target biomolecules within samples with robotic assistance for a sample holder carrying an array of reactants. BACKGROUND ART [0002] Assays for the detection of target biomolecules within a sample, especially of multiple target biomolecules within a sample, are often performed by applying a volume of the sample to a test slide, membrane, or other substrate having immobilized reactants which may interact with the target or targets to form detectable complexes. These immobilized reactants are usually disposed at fixed locations, with samples brought to these locations. U.S. Pat. No. 5,139,743, for example, discloses a biochemical analysis apparatus wherein an applicator takes up a liquid sample and applies the sample to a fixed position test film for chemical analysis of the sample. [0003] Sometimes complexes of target biomolecules and reactants are visually detectable directly after an...

Claims

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Application Information

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Patent Type & Authority Applications(United States)
IPC IPC(8): B01L3/02B01L9/00G01N21/64B01J19/00C12M1/00C12M1/34C12Q1/68C40B40/06C40B60/14G01N21/27G01N21/47G01N21/78G01N33/483G01N33/53G01N33/543G01N33/545G01N33/552G01N35/00G01N35/02G01N35/04G01N35/10G01N37/00
CPCB01J19/0046Y10T436/25B01J2219/00315B01J2219/00378B01J2219/0043B01J2219/00432B01J2219/00513B01J2219/00527B01J2219/00585B01J2219/0059B01J2219/00596B01J2219/00605B01J2219/0061B01J2219/00612B01J2219/00626B01J2219/0063B01J2219/00657B01J2219/00659B01J2219/00691B01J2219/00711B01J2219/00722B01L3/0275B01L3/508B01L3/5085B01L2300/0636B82Y30/00C40B40/06C40B60/14G01N21/6452G01N35/00029G01N35/0099G01N2035/00118G01N2035/00158G01N2035/1055G01N2035/1062Y10T436/11Y10T436/112499B01J2219/00292
Inventor COASSIN, PETER J.MCNEAL, JACK D.HELPHREY, DAVID B.
Owner AFFYMETRIX INC