Application of AKAP4 protein with 186th-site N-114.04278 in preparing reagent for diagnosing severe oligoasthenospermia
A diagnostic reagent, the technology of less weak sperm, applied in the field of medicine and molecular diagnosis
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Embodiment 1
[0124] Example 1: Screening of biomarkers associated with severe oligoasthenospermia
[0125] The specific screening method is as follows:
[0126] 1. Sample processing and experimental analysis
[0127]1. Extraction of the whole protein of sperm cells: the same amount of severe oligospermia and normal sperm samples were washed three times with DPBS, and the same amount of RIPA lysate was added to sonicate for 1-2 minutes, incubated on ice for 30 minutes to lyse, and centrifuged at 4°C at 14,000g ×20min to take the supernatant. Protein concentration was determined using the Bradford method.
[0128] 2. Proteolysis: Take approximately 150 μg of sperm protein from the samples of severe oligospermia and normal sperm, use 10% polyacrylamide gel electrophoresis (SDS-PAGE) to separate the proteins, and divide each into 5 parts for enzymatic hydrolysis. Peptides were desalted using ziptip.
[0129] 3. Mass Spectrometry: Nanoflow Liquid Chromatography Separation: Phase A: Water co...
Embodiment 2
[0185] Embodiment 2: clinical detection verification
[0186] Taking 4 healthy samples and 8 clinically diagnosed severe oligoasthenospermia samples as the research objects for verification, the serine at the 208th position of the AKAP3 protein and the mass deviation of -113.05347 at the 186th position of the AKAP4 protein were detected respectively in the above samples. Asparagine shifted, asparagine with mass shift of -114.04278 at position 186 of AKAP4 protein, glutamine with mass shift of -17.02660 at position 617 of AKAP4 protein, lysine with mass shift of +211.09682 at position 733 of AKAP4 protein , lysine with +42.01108 mass shift at position 531 of ATP5A1 protein, lysine with +42.01108 mass shift at position 87 of COX4I1 protein, threonine with +79.96685 mass shift at position 64 of GAPDHS protein and 692 position of KIAA1683 protein The respective detection frequencies of serine with +79.96685 mass shift occurred, and the samples to be tested were diagnosed according...
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