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High-throughput gene sequencing big data analysis cloud platform system

A gene sequencing and big data technology, applied in sequence analysis, data processing applications, electrical digital data processing, etc., can solve problems such as inability to adjust analysis parameters, inability to report analysis results, and difficulty in uploading

Inactive Publication Date: 2018-09-14
CHANGZHOU UNIV
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  • Abstract
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  • Application Information

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Problems solved by technology

However, users are required to be very proficient in the sequencing data analysis process, and it is very difficult to upload very large sequencing data files to the galaxy server, and it is impossible to form a report on the analysis results; BGI online is an online bioinformatics platform launched by BGI, but the standardized analysis it provides The process cannot adjust the analysis parameters, does not support exploratory analysis, and cannot push the analysis results to the mobile terminal; Biomark Biocloud Platform only provides some standard analysis processes, and cannot automatically generate analysis reports

Method used

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  • High-throughput gene sequencing big data analysis cloud platform system

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Embodiment Construction

[0058] The present invention will be described in detail in conjunction with accompanying drawing now. This figure is a simplified schematic diagram only illustrating the basic structure of the present invention in a schematic manner, so it only shows the components relevant to the present invention.

[0059] like figure 1 As shown, a high-throughput gene sequencing big data analysis cloud platform system of the present invention includes a data file management module, a sample and experiment management module, a workflow management module, an analysis task management module, a work order management module, and a mobile terminal service module, disk quota management module, resource sharing management module, and user and authority control module.

[0060] 1. The data file management module is responsible for file downloading, annotation of original gene sequencing data files, file browsing and routine operations, site-wide file search and filtering, and basic data maintenanc...

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Abstract

The invention provides a high-throughput gene sequencing big data analysis cloud platform system. The high-throughput gene sequencing big data analysis cloud platform system comprises nine functionalmodules, namely a data file management module, a sample and experiment management module, a workflow management module, an analysis task management module, a work order management module, a mobile terminal service module, a disk quota management module, a resource sharing management module and a user and authority control module. The high-throughput gene sequencing big data analysis cloud platformsystem supports cloud storage and high-performance computing clusters, achieves storage and analysis of high-throughput gene sequencing big data, and remotely manage experiments, samples and data bya WEB terminal and mobile terminal technology, remotely controls and views analysis tasks, and achieves seamless connection of a big data cloud storage system and a high-performance computing clustersystem; the high-throughput gene sequencing big data analysis cloud platform system supports online management of the gene sequencing big data, is automatic in analysis process, pushes an analysis result report, and achieves a one-stop solution of generation of the analysis report from the gene sequencing data.

Description

technical field [0001] The invention relates to the technical field of gene sequencing equipment, in particular to a high-throughput gene sequencing big data analysis cloud platform system. Background technique [0002] In the prior art, galaxy is an open high-throughput gene sequencing data analysis platform, which integrates commonly used bioinformatics software tools, and users can create analysis processes through its web interface. However, users are required to be very proficient in the sequencing data analysis process, and it is very difficult to upload very large sequencing data files to the galaxy server, and it is impossible to form a report on the analysis results; BGI online is an online bioinformatics platform launched by BGI, but the standardized analysis it provides The process cannot adjust the analysis parameters, does not support exploratory analysis, and cannot push the analysis results to the mobile terminal; Biomarker Biocloud Platform only provides some...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): G06F19/22G06F19/28G06Q10/06
CPCG06Q10/067G16B30/00G16B50/00
Inventor 刘辉
Owner CHANGZHOU UNIV
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