Reagent kit and method for detecting M.tuberculosis isoniazide drug tolerance mutation gene
A technology for Mycobacterium tuberculosis and drug-resistant mutations, applied in the biological field, can solve problems such as cumbersome operations, difficulty in achieving rapid clinical detection by linear hybridization, and long cycle times
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Embodiment 1
[0119] 1. Design and synthesis of primers
[0120]By calling the whole genome sequence of Mycobacterium tuberculosis in GenBank, and targeting katG (GenBank Accession Number NC_000962, 2153889-2156111 nucleotides), inhA (GenBank Accession Number is NC_000962 1674202-1675011 nucleotides) aphC (GenBank Accession Number is NC_000962 No. 2726193-2726780 nucleic acid), primer design is carried out, and the specific amplification screened out is better, and the sequence suitable for the multiplex reaction system is as follows.
[0121] The katG primer sequence is as follows:
[0122] JH-katGF02: TCACACTTTCGGTAAGACCCAT (SEQ ID NO.: 1)
[0123] JH-katGR02: AGCTCCCACTCGTAGCCGTA (SEQ ID NO.: 2)
[0124] The primers for inhA are as follows:
[0125] JH-inhAF02: ACACCGACAAACGTCACGAG (SEQ ID NO.: 3)
[0126] JH-inhAR02: CCTCCGGTAACCAGGACTGA (SEQ ID NO.: 4)
[0127] The primers for aphC are as follows:
[0128] JH-aphCF02:GGTGTGATATATCACCTTT (SEQ ID NO.:5)
[0129] JH-aphCR02: CTCTCC...
Embodiment 2
[0175] Embodiment 2: National reference product detection experiment
[0176] 1. Detection of negative and positive reference products:
[0177] 1) Extraction of nucleic acid samples
[0178] All negative and positive national ginseng samples were extracted with a kit (Nucleic Acid Extraction or Purification Kit, Sun Yat-Sen University Daan Gene Co., Ltd., Yuesui Machinery No. 20170668) for nucleic acid extraction
[0179] Detection:
[0180] The wild-type and mutant plasmids were used as negative and positive reference materials respectively, and the national ginseng samples were tested
[0181] 2. Detection of the lowest detection limit sensitivity
[0182] 1) Sensitivity detection of drug resistance detection limit
[0183] Sensitivity reference samples come from a nominal concentration of 1×10 5 National reference substance of CFU / ml (National Institute for Food and Drug Control). According to the instructions of the national reference product of the Mycobacterium tu...
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