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Detection probe of Skeletonema costatum

A technology for detecting probes and ribs, which is applied in the field of oligonucleotide probes and specific probes, which can solve the problems of large fluctuations in detection results, small number of capture probes, and difficult operation, so as to facilitate the search and implementation , Good applicability and high stability

Inactive Publication Date: 2005-08-31
OCEAN UNIV OF CHINA
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  • Summary
  • Abstract
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Problems solved by technology

Its main disadvantages are: first, because the length of the capture probe is only 10-30 bp, the number of capture probes that can effectively distinguish close relatives of microalgae is very small; second, it is necessary to prevent RNA degradation during the entire detection process, However, various steps such as washing and antibody reaction can easily cause RNA degradation, so the operation is difficult and the test results fluctuate greatly

Method used

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  • Detection probe of Skeletonema costatum
  • Detection probe of Skeletonema costatum

Examples

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Embodiment

[0031] Example: Qualitative and quantitative detection of Skeletalum costa by using S1 enzyme protection analysis for rRNA and sandwich hybridization technology.

[0032] In this example, the combination of S1 enzyme protection analysis technology and sandwich hybridization technology is used to realize the qualitative and quantitative detection of Skeletonema costatum. in marine red tide organisms, and the steps are as follows:

[0033] 1.1 Searching for the specific region of Skeletalum costa rRNA and the design and synthesis of S1 enzyme protection analysis probe

[0034] By determining the 18S rRNA sequence of the ribosomal small subunit of Sclerostis costanum and performing multiple sequence comparisons with the rRNA sequences of other algae, it was found that the 30-100 region of the small subunit rRNA was different from other algae, and the sequence of this region was determined to be a characteristic sequence ; Design and synthesize the S1 enzyme protection analysis pr...

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Abstract

A detecting probe for mid-rib-bar seaweed is disclosed. A group of probes, whose core is SI enzyme protecting and analyzing probe, is synthesized for the particular rRNA region of mid-rib-bar seaweed in order to qualitatively and quantitatively detect the rRNA of said seaweed. Said tetecting probe includes Si enzyme protecting and analyzing probe, capture probe and signal probe or binding probe.

Description

technical field [0001] The invention relates to a group of oligonucleotide probes for algae detection, in particular to specific probes for the qualitative and quantitative detection of Skeletalum costatum. It belongs to the field of nucleic acid detection. Background technique [0002] Skeletonema costatum is a kind of eurythermal and euryhaline phytoplankton that widely exists in the world, and it is also one of the most common dominant species of diatoms in my country's coastal waters. This species is a good bait for marine secondary producers, and it is also a common red tide organism in my country's coastal waters and a good pollution indicator. In economical seaweed farming areas, it often competes with kelp and laver for nutrients. Cause economic algae to change color, even rot and lose edible and commercial value; it is also reported that the bloom of Sclerostena mesoscarcinus as the dominant species can cause damage to the gills of Atlantic salmon and eventually die...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/68
Inventor 于志刚李荣秀蔡青松米铁柱甄毓
Owner OCEAN UNIV OF CHINA
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