DNA methylation diagnostic test for breast cancer
a technology of methylation and breast cancer, applied in the direction of anti-cancer agents, biochemistry apparatus and processes, drug compositions, etc., can solve the problems of overtreatment of a significant number of patients, no tool to predict concurrent or subsequent invasion of dcis,
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nt of an Epigenetic Biomarker Panel for DCIS Invasiveness
[0218]DNA methylation patterns were evaluated in 7 DCIS samples from patients without reported invasion (pure DCIS), and 3 DCIS samples from patients with IDC. In order to identify DNA methylation changes exclusive to cancer cells, malignant cells located within the involved ducts of DICS were isolated by laser capture microdissection (FIG. 1A). Genome-wide profiling of DNA methylation was performed. Reduced representation bisulfite sequencing (RRBS) was used to evaluate DNA methylation patterns at gene promoters in captured cells (FIG. 1C). Clustering analysis clearly separated DCIS samples into two epigenetic groups. The first DCIS epigenetic group was associated with almost no DNA methylation at promoters and obtained from patients lacking invasion (pure DCIS). At the same time, specimens from the second epigenetic group of DCIS were characterized by extensive accumulation of DNA methylation at promoters. This group contain...
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