Kit for detecting K-ras gene mutation and detection method with kit
A kit and mutation-type technology, applied in biochemical equipment and methods, microbiological determination/inspection, DNA/RNA fragments, etc., can solve problems that are not well applicable, difficult to detect, and low mutation rate of K-ras gene and other issues to achieve the effects of reducing the risk of contamination, high sensitivity, and fast detection speed
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Embodiment 1
[0051] Example 1: Establishment of a high-sensitivity K-ras gene mutation detection system
[0052] 1. Design and synthesis of primers, PNA and probes
[0053] For the No. 1 exon region of K-ras gene, 4 fluorescent probes and corresponding PCR primer pairs were designed, and a probe and its corresponding primer pair were optimized through a large number of experiments. Both primers and fluorescent probes were synthesized by a professional company, and the fluorescent reporter group at the 5' end of the labeled probe was FAM; the fluorescent quencher group at the 3' end of the labeled probe was MGB. The PNA sequence was synthesized by a domestic professional company.
[0054] 2. Preparation of K-ras gene wild type and its seven common mutant plasmid template standards
[0055] 1) Colorectal cancer tumor tissue specimens of K-ras wild type (SEQ ID NO:5) and seven common mutant types (SEQ ID NO:6~SEQ ID NO:12) were collected from the hospital, and DNA was extracted, wild type D...
Embodiment 2
[0087] Example 2: Comparison between this method and the sequencing method for detecting K-ras gene mutation in colorectal cancer
[0088] 1. DNA extraction
[0089] Seventy-eight fresh colorectal cancer tissue specimens were collected from a cancer hospital, and DNA extraction was performed using tissue DNA extraction kits.
[0090] 2. The method of the present invention detects K-ras gene mutation
[0091] Refer to Table 1 to configure a 50 μl PCR reaction system, 10 3 wild-type K-ras plasmid as a negative control, 2 μl ddH 2 O was used as a blank control, and the mixed plasmid with a 1% mutation ratio was used as a positive control. ℃ 30s) for 40 cycles; the fluorescence detection channel was set to FAM, and the gain was set to 6.
[0092] 3. The method of the present invention detects the qualitative judgment of K-ras gene mutation
[0093] The CT value without adding PNA in the reaction system is defined as CT -PNA , the CT value of adding PNA to the reaction syst...
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