Method and apparatus for displaying information

a technology of information display and information display, applied in the field of informatics, can solve the problems of complex array of graphs that does not help significantly with the analysis of interactive gene behavior or interpretation, and the inability to visualize patterns within the overall gene profile,

Inactive Publication Date: 2006-05-11
CHILDRENS MEDICAL CENT CORP
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

The behavior of a large number of interacting elements in a system is difficult to display, analyze and interpret.
However, displaying these genes as a matrix of expression behaviors provides a complicated array of graphs that does not help significantly with the analysis of the interactive gene behavior or with the interpretation of coherent patterns that emerge in the displayed expression profiles.
Similarly, other currently used analysis techniques for gene profiling, such as in hierarchical clustering, k-means clustering or principal component analysis, group genes into a small number of clusters relative to the total number of genes, and also fail to visualize patterns within the overall gene profile.
Existing gene clustering techniques are generally not capable of simultaneously monitoring multiple dimensions, and hence a new method is required to visualize these global time-dependent changes in gene expression profiles.

Method used

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  • Method and apparatus for displaying information

Examples

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Embodiment Construction

[0023] Referring to FIG. 1, for the purpose of simplifying the explanation, the method of the invention is herein described using the specific example of analyzing the expression of a large number of genes, either from a number of tissue specimens 10, in response to a variety of drugs 14 or a time course of specific drugs 16. However this is for the purpose of example only and the method can be used to display a large number of elements (in the example shown, genes) either statically or over time. For example, the information displayed could be a multitude of stocks as their prices vary with time; telephone numbers used as a function of time or any of a number of examples of systems having a large number of elements.

[0024] In FIG. 1, we assume that there are six samples, generating six gene expression profiles to be analyzed 18. In this example there are potentially three possible scenarios as to the origin of the samples and associated study question.

[0025] In the first scenario ...

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Abstract

A method for displaying large amounts of information. The method includes the steps of forming a spatial layout of tiles each corresponding to a representative reference element; mapping observed elements onto the spatial layout of tiles of representative reference elements; assigning a respective value to each respective tile of the spatial layout of the representative elements; and displaying an image of the spatial layout of tiles of representative elements. Each tile includes atomic attributes of representative elements. The invention also relates to an apparatus for displaying large amounts of information. The apparatus includes a tiler forming a spatial layout of tiles, each corresponding to a representative reference element; a comparator mapping observed elements onto said spatial layout of tiles of representative reference elements; an assigner assigning a respective value to each respective tile of said spatial layout of representative reference elements; and a display displaying an image of the spatial layout of tiles of representative reference elements.

Description

RELATED APPLICATIONS [0001] The application claims priority to U.S. Provisional application 60 / 452,857 filed Mar. 7, 2003 and assigned to the assignee of the instant application. The provisional application is hereby incorporated by reference herein. This application incorporates by reference U.S. utility application Ser. No. 09 / 985,963 filed Oct. 19, 2001 which claims priority to provisional application 60 / 242,009 filed Oct. 20, 2000 both of which assigned to the assignee of the instant invention. Both utility application Ser. No. 09 / 985,963 and provisional application 60 / 242,009 are herein incorporated by reference.FIELD OF THE INVENTION [0002] The invention relates generally to the field of informatics and more specifically to the field of informatic displays. BACKGROUND OF THE INVENTION [0003] The behavior of a large number of interacting elements in a system is difficult to display, analyze and interpret. Many techniques have been attempted to derive an ordered model from the e...

Claims

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Application Information

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Patent Type & Authority Applications(United States)
IPC IPC(8): G06T11/20G06T11/60
CPCG06T11/60
Inventor INGBER, DONALD E.HUANG, SUIEICHLER, GABRIEL
Owner CHILDRENS MEDICAL CENT CORP
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