Method using loop-mediated isothermal amplification technology to detect mycoplasma pneumoniae
A Mycoplasma pneumoniae and detection method technology, which is applied in the direction of biochemical equipment and methods, microbial measurement/inspection, etc., can solve the problems of LAMP-specific primers and kits, demanding requirements, and difficulty in popularization, etc., and is suitable for large-scale promotion Application, the effect of broad market prospects
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Embodiment 1
[0035] Example 1. Primer Design for LAMP Detection of Mp
[0036]The Mp-specific conserved target sequence (Mycoplasma pneumonia M129chromosome, complete genome, NCBI reference sequence NC_000912.1) was retrieved from the American Gene Database. After uploading the target sequence, the online primer design software PrimerExplorerV5 was used to preliminarily obtain multiple sets of primer sequences. According to the key factors of LAMP primer design, mainly including the stability of the primer end, GC content, the distance between the primers and the secondary structure, it is screened, and finally the LAMP primer is obtained (see the summary of the invention for details).
Embodiment 2
[0037] Embodiment 2, the establishment of the LAMP detection method of Mp of the present invention
[0038] Use the primers obtained in Example 1 for LAMP detection of Mp to perform LAMP detection on the throat swab specimen, and the specific steps are as follows:
[0039] [1] Reaction system
[0040] The nucleic acid in the sample to be tested was extracted using the Genomic DNA Extraction Kit of Tienensis Bacteria or the supernatant was collected after boiling for 10 min as a template, and wasothermally amplified under the guidance of the special primers for LAMP obtained in Example 1. Among them, the 25 μl LAMP reaction system includes: 2 μl of genomic DNA containing Mp, 20mM Tris HCl (pH 8.8), 10mM KCl, 8mM MgSO4, 10mM (NH4)2SO4, 0.1% Tween20, 0.8M betaine (betaine), 1.4mM dNTP each, 8U Bst DNApolymerase (purchased from NEB Company), the amount of primers: 5pmol F3 and B3, 40pmol FIP and BIP.
[0041] [2] Result judgment
[0042] After the reaction, visually observe whe...
Embodiment 3
[0043] Embodiment 3, prepare the LAMP detection kit of Mp
[0044] The LAMP reaction mixture is the specific amplification primer (5pMol F3; 5pMol B3; 40pMol FIP; 40pMolBIP), Bst DNA polymerase (8U), 2× reaction buffer (40mM Tris-Hcl, pH 8.8; 20mM KCl; 16mMMgSO4; 20mM (NH4)2SO4; 0.2% Tween20; 1.6M Betaine; 2.8mM dNTP each), SYBR GREEN and positive control were packaged together to obtain the LAMP detection kit for Mp of the present invention.
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