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Full-chain data analysis system for biomedicine

A data analysis system and biomedical technology, applied in the field of full-chain data analysis system, can solve problems such as disconnection, inability of the platform to have efficient transmission, storage, process development and online computing analysis at the same time, low applicability, etc., to achieve full coverage , good scalability and strong potential, and the effect of wide user audience

Pending Publication Date: 2021-08-06
SHANGHAI JIAO TONG UNIV
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Problems solved by technology

[0004] Although there are already all-round systems for biomedical data in the existing technology, due to the lack of relatively complete technical system design for medical information and molecular omics data, the above platforms often cannot simultaneously combine efficient transmission, storage, process development and Online computing analysis leads to disconnection and isolation between various platforms and research projects, and the current engineering application in biomedical projects is not high

Method used

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  • Full-chain data analysis system for biomedicine
  • Full-chain data analysis system for biomedicine

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Embodiment

[0030] Such as figure 1 As shown, a full-chain data analysis system for biomedicine includes a user management system, a warehouse management system and an online analysis system respectively connected to the personal center module. The warehouse management system includes a code warehouse module, a software warehouse module and a data warehouse Module, the online analysis system is equipped with a workflow application publishing subsystem, which calls the code and software in the code storage module and software storage module, analyzes the data stored in the data storage module or the received online uploaded data, and outputs the analysis result

[0031] In this embodiment, the data analysis system is supported by a high-performance computing platform, and the underlying resource support includes a cloud storage server, a Web server, and a computing resource scheduling system.

[0032] The functions of the user management system include reviewing the registration informati...

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Abstract

The invention relates to a full-chain data analysis system for biomedicine. The system comprises a user management system, a warehouse management system and an online analysis system which are respectively connected with a personal center module, the warehouse management system comprises a code warehouse module, a software warehouse module and a data warehouse module; the online analysis system is provided with a workflow application publishing subsystem, calls codes and software in the code storage module and the software storage module, analyzes the data stored in the data storage module or the received online uploaded data, and outputs an analysis result. Compared with the prior art, the method has the advantages of wide longitudinal coverage of analysis links, wide transverse coverage of analysis objects, low development complexity, good expandability, online operation and the like.

Description

technical field [0001] The invention relates to the technical field of data analysis, in particular to a full-chain data analysis system for biomedicine. Background technique [0002] With the rise of the application of high-throughput omics technology in the field of life sciences, human beings' understanding of disease phenomena at the molecular level has achieved unprecedented development, and the concept of "precision medicine" has accelerated the combination of omics analysis and clinical research. How to efficiently use the patient's molecular omics and clinical information data to carry out individualized fine disease classification and precision medical intervention has become a research hotspot in the field of bioinformatics. In order to store, manage, share and apply massive genetic resources, an open source biomedical data analysis system emerged as the times require. [0003] At present, biomedical analysis systems can be divided into three categories according ...

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Application Information

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IPC IPC(8): G16B40/00G16B50/00
CPCG16B40/00G16B50/00Y02A90/10
Inventor 吕晖张悦宁任永永程志伟李磊杰顾坚磊王晓雷
Owner SHANGHAI JIAO TONG UNIV
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