The invention discloses high-temperature-resistant waterproof epoxy asphalt and a preparation method thereof. The high-temperature-resistant waterproof epoxy asphalt is prepared from the following raw materials in parts by weight: 40-50 parts of asphalt, 5-10 parts of concrete, 20-30 parts of bisphenol A epoxy resin, 5-7 parts of higher aliphatic amine, 1-2 parts of acrylonitrile, 0.2-0.4 part of epoxy chloropropane, 3-4 parts of hyper-branched polyester, 1-2 parts of an antioxidant, 2-3 parts of a filler and 0.1-0.2 part of a dispersing agent, wherein the filler is a mixture of talcum powder, diatomite and mica powder, and the higher aliphatic amine is one or more of octadecyl amine and dodecyl amine. The bisphenol A epoxy resin and the asphalt are mixed, a three-dimensional interpenetrating network structure polymer can be formed, the adhesive force, the tensile strength and the thermal stability of the product can be fundamentally changed, hyper-branched polyester is added, the asphalt is subjected to toughening modification, the problem of poor compatibility can be avoided, and the tensile strength of the product at low temperature can be improved.