Preparation method of anti-erbB2 functional antibody based on erbB2 protein extracellular C-terminal functional epitope characteristics
An antibody and human antibody technology, applied in the direction of antibodies, anti-animal/human immunoglobulin, anti-receptor/cell surface antigen/cell surface determinant immunoglobulin, etc., can solve the toxicity, limited efficacy and expensive treatment fees, etc.
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Embodiment 1
[0058] Example 1 Rational design of anti-erbB2 antibody
[0059] 1. Materials:
[0060] InsightII 2005 program package (MSI molecular simulation, San Diego), which includes:
[0061] Homology homology modeling;
[0062] Discover mechanical optimization;
[0063] Discover_3 normal temperature dynamics simulation;
[0064] Docking molecular docking;
[0065] Delphi apparent electrostatic potential energy analysis.
[0066] Ludi molecular design program (1995);
[0067] IBM graphics workstation;
[0068] PDB 2008 database (download from www.rcsb.org);
[0069] SwissProt database (2008, online download);
[0070] Kabat database (2001, online download);
[0071] IMGT database (2008, online download).
[0072] 2. Method results:
[0073] 1. Simulation of the space conformation of the extracellular region of the antigen erbB2
[0074] Using the existing crystal structure of the erbB2 extracellular region (PDB code: 1n8y), on the basis of the homology modeling method, hydr...
Embodiment 2
[0083] Preparation and functional verification of the second antibody erbB2 antibody HF1
[0084] 1. Materials:
[0085] The primer design software was biosun software, and the primers were synthesized by Shanghai Yingjun Biotechnology Co., Ltd.; Pyrobest DNA polymerase was a product of TAKARA Company; dNTP was a product of TAKARA Company; pGEM-T Easy vector system was a product of Invitrogen Company; T4DNA ligase was a product of NEB Company ;Gene sequencing was completed by Beijing Nuosai Genome Research Center Co., Ltd.; the antibody eukaryotic expression vector pTGS-FRT-DHFR was constructed by our company and applied for a national patent (patent authorization number: ZL200510064335.0); liposome and MTT are products of Invitrogen , goat anti-human IgG, and horseradish-labeled goat anti-human IgG and human IgG were prepared by our company; the pEGFP-N1 vector was a product of Clonetech; the endonuclease was a product of NEB; SKVO3, MCF7, and SKBR3 were purchased from ATCC; T...
Embodiment 3
[0151] Example 3 Preparation of erbB2 antibodies HF2, HF3, HF4, HF5, HF6 and their functional verification
[0152] According to the method described in Example 2, SEQ_ID NO: 2 and SEQ_ID NO: 8 were randomly selected as the heavy chain and light chain variable region amino acid sequences of antibody HF2 respectively; SEQ_ID NO: 3 and SEQ_ID NO: 9 were respectively used as heavy chains of antibody HF3 and light chain variable region amino acid sequences; SEQ_ID NO: 4 and SEQ_ID NO: 10 are respectively the heavy chain and light chain variable region amino acid sequences of antibody HF4; SEQ_ID NO: 5 and SEQ_ID NO: 11 are respectively the heavy chain of antibody HF5 and light chain variable region amino acid sequences; SEQ_ID NO: 6 and SEQ_ID NO: 12 are respectively the heavy chain and light chain variable region amino acid sequences of antibody HF6; use computer-aided analysis to investigate the complex effect of these antibodies and target antigen erbB2 mode of rationality. Us...
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