Computation cloud platform-based microbial diversity interaction analysis system and method thereof

Inactive Publication Date: 2017-11-21
上海桑格信息技术有限公司
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  • Abstract
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  • Claims
  • Application Information

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Problems solved by technology

[0006] In view of the deficiencies in the above-mentioned technologies, the present invention provides a microbial diversity interactive analysis system and method based on a computing cloud platform to solve the problems that personal computers and workstations cannot complete data processing and the existing manual business processes are inefficient

Method used

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  • Computation cloud platform-based microbial diversity interaction analysis system and method thereof
  • Computation cloud platform-based microbial diversity interaction analysis system and method thereof
  • Computation cloud platform-based microbial diversity interaction analysis system and method thereof

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Embodiment Construction

[0041] In order to express the present invention more clearly, the present invention will be further described below in conjunction with the accompanying drawings.

[0042] see figure 1 , the microbial diversity interactive analysis system based on the computing cloud platform of the present invention, comprising

[0043] The project management module 10 is used to view and manage project information, and comprehensively manage all status analysis projects through projects, tasks, applications and files;

[0044] The basic analysis task submission module 11 is used to set the basic parameters to run the task, and integrate and package the results and raw data into corresponding project files according to the preset format;

[0045] An interactive result analysis module 12, configured to generate analysis results according to user requests, and display the results visually;

[0046] The project management module is connected with the interactive result analysis module through...

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Abstract

The invention discloses a computation cloud platform-based microbial diversity interaction analysis system and method thereof. The system comprises a project management module, a basic analysis task submission module and an interactive result analysis module. The method comprises the following steps of: firstly uploading sequencing data to a local cluster server, establishing a project in the project management module, uploading a database of customers to the local cluster server or selecting to use an online database, and locking the project in the project management module or sharing the project to other users to be operated; in the basic analysis task submission module, carrying out parameter analysis on the sequencing data by a user through a visual interface and generating a project file after the analysis; before the analysis, judging whether data quality control is qualified or not, if the judging result is positive, carrying out the parameter analysis, and otherwise, directly returning an error; and transmitting the generated project file to the interactive result analysis module to carry out interactive analysis until an intuitively displayed report is obtained.

Description

technical field [0001] The invention relates to the technical field of biological information analysis, in particular to a microbial diversity interactive analysis system and method based on a computing cloud platform. Background technique [0002] As an important part of biological groups, microorganisms have a huge population, a wide range of distribution, and strong adaptability and reproduction capabilities. Some non-culture methods to study microbial diversity, such as DNA fingerprinting technology, microarray gene chips, etc., have overcome some shortcomings of traditional culture techniques and obtained some soil microbial information that cannot be isolated and cultured. The high-throughput sequencing method realizes the direct sequencing of large-scale microbial genes, greatly improves the sequencing throughput, and can obtain more information in the study of microbial species and structural diversity. [0003] Bioinformatics data analysis is the most critical step...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): G06F19/10G06F19/26G16B45/00
CPCG16B45/00G16B99/00
Inventor 余果任一郭权王兆月董亚晨刘林梦赵建华杨慧宣红东
Owner 上海桑格信息技术有限公司
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