Method for specifically detecting H1 influenza A virus subtype by combining RPA (Recombinase Polymerase Amplification) with immunofluorescence chromatography
A specific and species-specific technology, applied in the field of RPA combined with immunofluorescence chromatography to specifically detect H1 influenza subtypes, can solve the problems of not being able to detect anytime, anywhere, not suitable for bedside detection, and long testing time.
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[0043] 1. Materials and methods
[0044] 1.1 Materials
[0045] Template sequence: Search lectin genes in NCBI database: H1 (S67220.1), H5 (AY854190.1) and H7 (AJ493472.1); neuraminidase genes: N1 (AB539741.1) and N9 (CY179917. 1), send these five gene sequences to Sangon Bioengineering (Shanghai) Co., Ltd. for synthesis.
[0046] General primer design: search 17 variants of lectin gene (H1-H17) and 10 variants of neuraminidase gene (N1-N10) from the NCBI database, search 6 for each variant, perform sequence alignment, and find out which of the variants The variable regions between the variants are then compared to find the conserved regions inside the variants, and then the intersection of the two regions is used as the template sequence to design specific primers, and 5 pairs of primers are designed for each gene, and the designed primers are sent to Sangon Bioengineering (Shanghai) Co., Ltd. was used for the synthesis.
[0047] Table 1 Primers for Amplification of Influe...
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