LAMP (loop-mediated isothermal amplification) primer group and detection method for rapidly detecting strawberry aphelenchus destructor

A detection method and primer set technology are applied in the field of molecular biology detection of plant diseases, which can solve the problem of high equipment requirements, and achieve the effects of high sensitivity, low equipment requirements and strong specificity.

Pending Publication Date: 2022-04-08
PLANTS & ANIMALS & FOOD TESTING QUARANTINE TECH CENT SHANGHAI ENTRY EXIT INSPECTION & QUARANTINE BUREAU
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  • Summary
  • Abstract
  • Description
  • Claims
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AI Technical Summary

Problems solved by technology

However, the conventional specific primer PCR method has high requirements for equipment: PCR instrument, gel electrophoresis instrument and other equipment are required

Method used

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  • LAMP (loop-mediated isothermal amplification) primer group and detection method for rapidly detecting strawberry aphelenchus destructor
  • LAMP (loop-mediated isothermal amplification) primer group and detection method for rapidly detecting strawberry aphelenchus destructor
  • LAMP (loop-mediated isothermal amplification) primer group and detection method for rapidly detecting strawberry aphelenchus destructor

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Embodiment 1

[0054] The present invention will be further described below in conjunction with specific embodiments. The molecular biology experimental methods not specifically described in the following examples can be carried out by referring to the methods listed in the book "Molecular Cloning Experiment Guide" (Third Edition) by J. Sambrook or conventional methods in the field, or Follow the kit and product instructions. The materials, reagents, etc. used in the following examples can be obtained from commercial sources unless otherwise specified.

[0055] 1. Nematode DNA extraction

[0056] Nematode DNA was extracted using DNeasy Blood & Tissue Kit (QIAGEN) kit, and the extraction method was carried out according to the instruction manual of the kit.

[0057] 2. LAMP primer design

[0058] The design of LAMP primers is more complicated than that of conventional PCR methods. Generally, the reaction includes at least 4 specific primers: outer primers (F3, B3) and inner primers (FIP, B...

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Abstract

The invention discloses an LAMP (loop-mediated isothermal amplification) primer group and a detection method for rapidly detecting strawberry aphelenchoides, and belongs to the field of molecular biological detection of plant diseases. The LAMP primer group comprises a pair of outer primers, a pair of inner primers and a loop primer, wherein the nucleotide sequences of the primers are respectively as shown in SEQ ID NO.1-SEQ ID NO.5. The method comprises the following steps: by taking DNA of a sample to be detected as a template, carrying out LAMP amplification by utilizing an LAMP primer group; and judging whether the to-be-detected sample contains the strawberry aphelenchus destructor or not according to an amplification result. The method is rapid and convenient; the specificity is high; the sensitivity is high; the steps are simple; result determination is simple; meanwhile, the method is safe to human and environment, toxic reagents such as EB do not need to be used in the detection process, and the detection requirement for rapidly and accurately identifying strawberry aphelenchus destructor in a first-line laboratory of inspection and quarantine can be met.

Description

technical field [0001] The invention belongs to the field of molecular biology detection of plant diseases, and in particular relates to a LAMP primer set and a detection method for rapidly detecting the nematode sciatica. Background technique [0002] Strawberry fragariae (Aphelenchoides fragariae) belongs to the nematode phylum, Aphelenchoides, Aphelenchoides, Aphelenchoides suborder, Aphelenchoides, Aphelenchoides subfamily, Aphelenchoides genus. It is a leaf and bud parasitic nematode that can infect a variety of crops and ornamental plants. It is a quarantine pest in my country. [0003] Strawberry slippery nematode can harm strawberry, an important economic crop, and does not directly invade the plant tissue. It feeds on the growth point of strawberry by ectoparasites, causing the leaves to shrink and twist, and the leaves are often small; the feeding activities of the nematode can cause strawberry fruit Buds are reduced, resulting in reduced strawberry yield, causing...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/6888C12N15/11C12Q1/6844
Inventor 俞禄珍宋绍禕李帅田沂民王一椒李丽
Owner PLANTS & ANIMALS & FOOD TESTING QUARANTINE TECH CENT SHANGHAI ENTRY EXIT INSPECTION & QUARANTINE BUREAU
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