The invention provides a primer probe combination and a kit for detecting eDNA of acipenser Yangtze River and application of the primer probe combination and the kit, and belongs to the technical field of
molecular biology and
molecular ecology. The invention designs two groups of primer probe combinations for detecting eDNA of acipenser Yangtze River, and the
nucleotide sequences of the primer probe combinations are respectively shown as SEQ ID No.1-6. According to the method, eDNA in a
water sample to be detected is extracted, ddPCR amplification is carried out by utilizing the primer probe combination, if positive amplification can occur, it is judged that the
water sample contains the eDNA of the Yangtze River sturgeons, and then tracking of behavior tracks of Yangtze River
sturgeon schools is achieved. The primer probe combination disclosed by the invention can be used for carrying out
specific detection on target
DNA fragments of the acipenser pratus in a culture
water body and a field
water body, the sensitivity is relatively high and is 0.07 copies / mu L, and the primer probe combination can be widely applied to the fields of eDNA detection of the acipenser pratus and
resource protection of rare fishes.