Looking for breakthrough ideas for innovation challenges? Try Patsnap Eureka!

Primer for detecting pytophthora capsici developed on basis of plygalacturonase Pcipg8 gene and method therefor

A technology for auxiliary detection of Phytophthora capsici, applied in the field of primers for detection of Phytophthora capsici, can solve the problems of weak control effect, inability to detect and early warning of pathogenic characteristics and occurrence trend of pathogens, ignoring comprehensive prevention and control and efficient control measures, etc. Achieve the effect of blocking reproduction and spread and reducing the cost of disease prevention and control

Inactive Publication Date: 2013-08-14
SHANDONG AGRICULTURAL UNIVERSITY
View PDF1 Cites 0 Cited by
  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

Traditional disease prevention and control strategies mainly rely on control measures such as varieties, cultivation, chemical control, and ecological regulation. Comprehensive prevention and control and high-efficiency management measures are short and get twice the result with half the effort. The control effect is very small, and it is difficult to control the occurrence and prevalence of diseases in the end.
[0003] In recent years, PCR technology and its related molecular detection technology have been widely used in the molecular detection and early warning of the growth and decline dynamics of plant pathogens. Ribosomal rDNA / ITS sequences are used to design specific primers, and targeted researches on Phytophthora soybean and Phytophthora infestans have been carried out. Molecular detection technology research on mildew, Phytophthora winteris, Phytophthora parasitica, and Phytophthora capsici, but these technical R&D achievements can only detect and warn the activity dynamics of the pathogens, but cannot detect and warn the pathogenic characteristics and occurrence trends of the pathogens

Method used

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
View more

Image

Smart Image Click on the blue labels to locate them in the text.
Viewing Examples
Smart Image
  • Primer for detecting pytophthora capsici developed on basis of plygalacturonase Pcipg8 gene and method therefor
  • Primer for detecting pytophthora capsici developed on basis of plygalacturonase Pcipg8 gene and method therefor
  • Primer for detecting pytophthora capsici developed on basis of plygalacturonase Pcipg8 gene and method therefor

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0028] Example 1. Acquisition of the primer pair ipg8F-R for specific detection of Phytophthora capsici and its specificity and sensitivity

[0029] In this embodiment, Phytophthora capsici is used as the test material, and according to qRT-PCR technology, the polygalacturonase gene of Phytophthora capsici is detected to have Pcipg 2-3 (GenBank numbers are: DQ415987, DQ415988), Pcipg5 (GenBank numbers are: : EF558847), Pcipg 8-18 (the nucleotide sequences of which are respectively sequence 3-13 in the sequence table) these 14 gene members have differences in RNA transcription and expression levels in capsicum disease fruits, and comparing relevant data information, Pcipg 8 was Defined as the target disease-causing gene, multiple pairs of specific primers for Pcipg 8 gene (sequence 3) were designed and synthesized, and the specificity of these primer pairs to all tested strains and the sensitivity to Phytophthora capsici were tested. A pair of primer pair ipg8F-R with high specif...

Embodiment 2

[0115] Embodiment 2, Pcipg 8 gene-specific primer pair Ipg8F-R detects different diseased tissues and diseased field soil DNA PCR

[0116] The present embodiment has tested the detection effect of Ipg8F-R to Phytophthora capsici in diseased field soil, diseased stem, diseased fruit, diseased leaf, and specific method is as follows:

[0117] 1. DNA extraction

[0118] Transfer Phytophthora capsici SD33 to a V8 solid plate, and after culturing in the dark at 25°C for 2-3 days, take a colony piece (2 mm × 2 mm) from the edge of the colony by blowing air, and inoculate the wound on pepper (Zhongjiao No. 6) seedlings (7- 9 leaves) at the base of the stem, fruit, and micro-wounds of bacterial blocks of the same size were inoculated on pepper leaves, and then different diseased tissues were cut out, and diseased tissues were extracted with reference to the NaOH method of Wang et al. (Nucleic Acids Research, 1993, 21:4153-4154) DNA: Take a section of diseased stem, diseased fruit and...

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to View More

PUM

No PUM Login to View More

Abstract

The invention discloses a primer for detecting pytophthora capsici developed on the basis of plygalacturonase Pcipg8 gene and a method for detecting the pytophthora capsici. The primer for detecting the pytophthora capsici developed on the basis of the plygalacturonase Pcipg8 gene consists of single-strained DNA (deoxyribonucleic acid) shown by a sequence 1 in a sequence table and single-strained DNA shown by a sequence 2 in the sequence table. The primer can be used for carrying out qualitative and quantitative molecule detection on the phytophthora capsici leonian and different phytophthoracapsici leonian materials at different periods, and detecting and easily warning the primary infection source of the phytophthora capsici leonian and the dynamic status of the growth and decline of the germs at different periods in the process of infection, so that the optimum disease preventing and controlling period can be conveniently and timely confirmed, particularly the comprehensive prevention, control and treatment can be timely carried out in the early activity period of the germs, according to the existence and the quantity for detecting the oospore in the soil, the soil can be timely treated, the breeding and spreading of source germs can be cut off, and the disease preventing and controlling cost can be reduced.

Description

technical field [0001] The invention relates to a primer and a method for detecting Phytophthora capsici developed based on polygalacturonase Pcipg8 gene. Background technique [0002] Phytopathogenic oomycetes are an important class of plant pathogens, which can infect and harm a variety of plants and cause a variety of plant-destructive diseases, such as Phytophthora infestans, P. capsici, soybean blight P. sojae, P. parasitic, P. cinnamomi and P. hibemalis cause important diseases of potato, pepper, soybean, tobacco, camphor tree and citrus respectively. Serious years and even extinction. Oomycetes mainly use mycelium or oospores to survive the adverse environment in the diseased residue or soil and serve as the source of primary infection. Under suitable conditions, mycelium or oospores can germinate to produce sporangia-release zoospores , spread and infect by rain or air currents and cause plant diseases. Therefore, early and timely inspection and control of disease...

Claims

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to View More

Application Information

Patent Timeline
no application Login to View More
Patent Type & Authority Patents(China)
IPC IPC(8): C12Q1/68C12Q1/06C12Q1/04C12N15/11G01N21/64
Inventor 张修国
Owner SHANDONG AGRICULTURAL UNIVERSITY
Who we serve
  • R&D Engineer
  • R&D Manager
  • IP Professional
Why Patsnap Eureka
  • Industry Leading Data Capabilities
  • Powerful AI technology
  • Patent DNA Extraction
Social media
Patsnap Eureka Blog
Learn More
PatSnap group products