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Detection method and detection kit for polymorphism of CYP2C9 and VKORC1 genes

A technology of genetic polymorphism and detection kits, applied in biochemical equipment and methods, microbial measurement/testing, etc., can solve problems such as cross-contamination between samples, nucleic acid loss, and difficulties in clinical promotion

Inactive Publication Date: 2018-12-11
苏州道尔盾基因科技有限公司
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AI Technical Summary

Problems solved by technology

The most common method is the sequencing method, which has low cost and high throughput, but it takes a long time to operate and has low sensitivity, which is not suitable for rapid clinical detection; the high-resolution melting curve method has special requirements for equipment, and there are certain difficulties in clinical promotion.
However, the traditional fluorescent quantitative PCR method is widely used clinically, but this method generally uses the genotyping method to detect gene polymorphisms. This method has certain requirements for the number of samples and the distribution of polymorphisms. When the sample size is small, it cannot In addition, blood samples usually need to be extracted and purified to obtain nucleic acid as a template for fluorescent quantitative PCR amplification. Although the purified nucleic acid is of high purity, the cumbersome purification steps may not only cause cross-contamination between samples, At the same time, it is also easy to cause the loss of nucleic acid, thereby increasing the risk of subsequent fluorescent quantitative PCR failure

Method used

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  • Detection method and detection kit for polymorphism of CYP2C9 and VKORC1 genes
  • Detection method and detection kit for polymorphism of CYP2C9 and VKORC1 genes
  • Detection method and detection kit for polymorphism of CYP2C9 and VKORC1 genes

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Embodiment 1

[0149] Example 1: Detection of human CYP2C9 and VKORC1 gene SNP sites using nucleic acid mass spectrometry detection method

[0150] 1. Human Genomic DNA Extraction

[0151] (1) Genomic DNA extraction is performed on the patient's blood sample in a biological safety cabinet. Extraction experiments were performed using Blood&CellCulture DNA Mini Kit (Qiagen Cat No: 13323).

[0152] (2) Primer design

[0153] SNP site primers were designed for the SNP sites of human CYP2C9 and VKORC1 genes, and specific PCR primers and single-base extension primers were designed for the SNPs respectively. The sequences of the designed PCR primers are shown in Table 1.

[0154] Table 1

[0155]

[0156]

[0157] (3) Specific PCR reaction

[0158] The target fragments containing CYP2C9 and VKORC1 genes were amplified by specific PCR technology, and the amplification reaction was prepared according to the reaction system in Table 2. After the reaction system was prepared, the amplificatio...

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Abstract

The invention relates to a detection method and detection kit for polymorphism of CYP2C9 and VKORC1 genes. The detection method comprises the following steps: (1) designing specific primers aiming atthe CYP2C9 and VKORC1 genes; (2) amplifying a target segment containing the CYP2C9 and VKORC1 genes by utilizing specific PCR (Polymerase Chain Reaction); (3) digesting a PCR product segment by utilizing restriction endonuclease; (4) carrying out single base extension reaction; (5) carrying out desalting and purification treatment; and (6) analyzing gene sequences of the target genes CYP2C9 and VKORC1 through a nucleic acid mass spectrometer. The detection method for the polymorphism of the CYP2C9 and VKORC1 genes has the advantages of high detection accuracy, high experiment repeatability, great flux and low cost. The invention further provides a detection kit for the polymorphism of the CYP2C9 and VKORC1 genes; and the detection kit comprises a specific primer pair for amplifying the CYP2C9 and VKORC1 genes. According to the detection kit for the polymorphism of the CYP2C9 and VKORC1 genes, an experiment flow is simplified, the operation time of workers is short, the difficulty is small and the automation degree of experiments is high.

Description

technical field [0001] The invention relates to the technical field of biological detection, in particular to a detection method and a detection kit for CYP2C9 and VKORC1 gene polymorphisms. Background technique [0002] Warfarin (warfarin) is a vitamin K antagonist oral anticoagulant widely used clinically at present, and is used for anticoagulation in venous thromboembolism, myocardial infarction, ischemic stroke, and atrial fibrillation after heart valve replacement Treatment and prevention. The clinical efficacy and adverse reactions of warfarin vary greatly among individuals, and the dose is difficult to control, especially in the initial stage of warfarin anticoagulant therapy, which can easily lead to serious bleeding complications. It is estimated that among patients taking warfarin, 15.2% of them experience bleeding side effects every year, of which fatal bleeding accounts for 3.5%, and the difference in the stable dose of warfarin among different individuals can r...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/6858C12Q1/6883
CPCC12Q1/6858C12Q1/6883C12Q2600/106C12Q2600/156C12Q2531/113C12Q2565/627
Inventor 王文忠胡军田军龙陈苏平卜云璇
Owner 苏州道尔盾基因科技有限公司
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