HLA tissue matching and methods therefor
A tissue and tissue sample technology, applied in biochemical equipment and methods, genomics, proteomics, etc., can solve problems that have not yet been adopted
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[0052] To validate HLA predictions, three independent known patient records and samples were obtained from the 1000 Genomes Project (NA19238, NA19239, and NA19240), and then HLA typing was predicted as described above. Notably and unexpectedly, in addition to HLA-C (for NA19238), DRB1 (for NA19239) and HLA-C (for NA19240), HLA determination and prediction using the de Bruijn plot method as described above has a near-perfect match, such as figure 1 shown. It is worth noting that these three discrepancies could be explained by incorrect data in the published records. The HLA prediction method presented in this paper has demonstrated 100% accuracy in different groups of 5 HLAs in 3 independent datasets. According to this data, the "public" C*18:01 cannot be supported, while the predicted C*18:02 is fully supported. Furthermore, Mendelian inheritance dictates that a "published" DRB1*13:01 on both alleles is unlikely (provided that NA19238 and NA19239 are the parents of NA19240)...
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