Micropterus salmoides gender-related molecular marker
A technology of largemouth bass and molecular markers, which is used in the determination/inspection of microorganisms, DNA/RNA fragments, recombinant DNA technology, etc., and can solve the problem of difficulty in distinguishing male and female largemouth bass.
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Embodiment 1
[0026] Example 1 Screening and verification of male-specific DNA fragments of largemouth bass
[0027] Through the screening method of sex-related AFLP molecular markers, different primer combinations were selected from males and females for screening, and two pairs of primers amplified male and female specific bands. After sequencing analysis, two different DNA fragments of male and female largemouth bass were found. Among them, the specific DNA fragment of male largemouth bass is 268bp in length, and its sequence is SEQ ID NO: 1:
[0028] TATCTATTAACTCCACTCTTTCTATTAGAATGACAAGTATGAGATATGCTCAGCTCTCATATTGCCAAGGCAGCTTTCTCAGTCTTTATGATGATACGACAATGTCAAGAAAAGCAGCATCCA ATTCGTAATTCTCCT TAAACCATTAAACTGTTGTAACATAAATAGTTTAGGTGCCGTCTCCACTATTATTGTTCAACTATTATTCCTACTGTTAACAATAACAAAAATTAAAATTTCTATGAGTCTCCGTGTTGTTATTATTGAATG
[0029] The length of the specific DNA fragment of female largemouth bass is 254bp, and its sequence is SEQ ID NO: 2:
[0030] TATCTATTAACTCCACTCTTTCTATTAGAATGACAAGTAT...
Embodiment 2
[0032] Embodiment 2: Primer design and detection method for detection
[0033] Use the Primerselect function in the molecular biology software Lasergene to design primers for PCR amplification, and determine the sequences of the primers as follows:
[0034] Upstream primer: 5′-TATCTATTAACTCCACTCTTTC-3′
[0035] Downstream primer: 5′-CATTCAATAATAACAACACGGAG-3′;
[0036] In male individuals, the expected length of the amplified product was 268bp, and in female individuals, the length of the amplified fragment was 254bp.
[0037] The male and female largemouth bass whose sex was determined were selected, and after DNA was extracted, the above primer pairs were used for detection.
[0038] Specific steps are as follows:
[0039] 1. DNA extraction of male and female largemouth bass:
[0040] Use the phenol-chloroform method to extract the DNA of largemouth bass fin rays. The extracted samples are identified by 1% agarose gel electrophoresis for their integrity, and their OD val...
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