Primer set, detection method and rapid detection kit for gene detection of subgroup j avian leukosis virus
A technology for detection of avian leukosis virus and gene, applied in the direction of microorganism-based methods, biochemical equipment and methods, microorganisms, etc.
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Embodiment 1
[0052] Internal primer FIP, the nucleotide sequence of which is shown in SEQ ID NO: 3;
[0053] Internal primer BIP, the nucleotide sequence of which is shown in SEQ ID NO: 4;
[0054] Wherein, R is G or A, and Y is T or C.
[0055] Embodiment 2J Subgroup Avian Leukosis Virus Gene Rapid Detection Method
[0056] In this example, the samples selected for clinical examination were those suspected of avian leukosis infection, and the cell DNA was extracted according to the SQ Tissue DNA Kit of OMEGA Company.
[0057] The primer set designed in Example 1 was sent to Shanghai Handsome Biological Co., Ltd. for synthesis, and then the four primers were diluted to 25pM / ul respectively.
[0058] LAMP reaction system (total 25ul): 1ul each of FIP and BIP, 0.25ul each of F3 and B3, 8U of BST DNA polymerase, 2.5ul of 10× reaction buffer, 8ul of dNTP, 2.0ul of betaine, 1.0ul of magnesium sulfate, to be tested DNA sample (including negative and positive control substances) 1.0ul, repleni...
Embodiment 2J
[0059] When SYBR Green I fluorescent dye was added to the above reaction product, the color of the reaction solution changed and finally turned yellow, indicating that the sample of this example contained the gene of subgroup J of avian leukosis virus.
[0060] The betaine, large fragment of Bst DNA polymerase, magnesium sulfate, dNTP and 10× reaction buffer used in this example are all commercially available or equipped with the LAMP kit.
[0061] Embodiment 3 LAMP method detects the specificity test of J subgroup avian leukosis virus gene
[0062] In this implementation, 3 samples that have been identified as having the J subgroup avian leukosis virus gene were selected as the positive experimental group: Yangzhou Js-nt strain, Guangdong isolated sample strain SCAU-0901 and Guangdong isolated sample strain SCAU-CHN;
[0063] This embodiment selects 5 samples that have been identified and do not have the J subgroup gene of avian leukosis virus as the negative experimental gro...
Embodiment 3
[0065] The present invention carries out LAMP amplification respectively to above-mentioned positive experiment group, negative experiment group and negative and positive control, and the primer used is the primer group prepared in Example 1, and the LAMP reaction system is total system 25ul, contains internal primer FIP and BIP each 1.0ul, External primers F3 and B3 each 0.25ul, Bst DNA polymerase 1.0ul, 10× reaction buffer 2.5ul, betaine 2.0ul, magnesium sulfate 1.0ul, dNTP 8ul, DNA template 1.0ul and deionized water 7.0ul; 10× reaction buffer contains 200mM Tris-HCl pH 8.8, 100mM KCl, 100mM (NH 4 ) 2 SO 4 , 20mM MgSO 4 React with 1% Triton X-100 at a constant temperature of 63°C for 45min.
[0066] Each LAMP amplification product was equally divided into two parts, and one part was subjected to agarose gel electrophoresis, such as figure 1 As shown, the nucleic acid electrophoresis bands in the LAMP amplification results (1, 2, 3, 4) of the positive samples showed a la...
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