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Newly found hepatitis C virus epitope

A hepatitis C virus and epitope technology, applied in the fields of bioinformatics and immunology, can solve the problems of multiple virus quasi-species, immunogen selection, strength limitation, and slow progress

Inactive Publication Date: 2011-10-12
FOURTH MILITARY MEDICAL UNIVERSITY
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0005] Due to the necessity and urgency of HCV vaccine research, since the HCV gene was cloned in 1989, people have been working on vaccine research, but the progress is slow.
Earlier, people focused on the development of HCV envelope glycoprotein or polypeptide subunit vaccines. Like HIV vaccine research, due to the highly variable nature of HCV envelope glycoproteins, it is possible to produce neutralizing antibodies to control virus infection and replication. Encounter difficulties
The main reasons why the HCV vaccine is difficult to achieve are summarized in the following three points: ① The HCV genome mutation rate is high, the virus has many quasi-species, lacks protective antibodies, and cannot prevent reinfection of chimpanzees and humans, and the research of traditional preventive vaccines has encountered difficulties; ② HCV has poor replication ability and weak infectivity, so the virus titer in the body is low, and it is not easy to culture in vitro. The process of virus replication infection and pathogenesis are still unclear, and some proteins encoded by HCV, such as core protein and NS protein It may be related to the carcinogenicity of HCV, and the selection and strength of immunogens are limited; ③ There is a lack of ideal cell models for in vitro infection. Animal models include chimpanzees, and other animals, even primates, such as baboons and rhesus monkeys. etc. cannot be infected by HCV, limiting studies for vaccine evaluation

Method used

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Examples

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Embodiment 1

[0029] The design of the gene sequence of embodiment 1. recombinant HCV multi-epitope vaccine:

[0030] 1. Establishment of HCV proteome database

[0031] Search the uniprot protein database (http: / / beta.uniprot.org / ) with keywords: organism:"hepatitis c virus" AND name:"genome polyprotein" AND fragment:no AND reviewed:yes, and select the popular HCV genotypes in China The protein sequence databases of 1b, 2a, 2b, 3a, 3b, 6a were constructed (Table 1). The database contains 17 HCV proteome sequences.

[0032] Table 1. Selected HCV proteome databases

[0033] Uniprot ID NO.

genotype

isolate strain

P26663

1b

BK

Q9WMX2

1b

Con1

Q03463

1b

HC-J1

O92972

1b

HC-J4

P26662

1b

Japanese

Q00269

1b

HC-JT

Q913V3

1b

HCR6

P29846

1b

Taiwan

P26660

2a

HC-J6

Q99IB8

2a

JFH-1

P26661

2b

HC-J8

Q9DHD6

2b

JPUT97017

Q81495...

Embodiment 2

[0053] Example 2. Based on our predicted 12 antigenic epitopes, the preliminary exploration of the research method for the immunological characteristics of recombinant dominant epitopes

[0054] 1. Epitope selection and recombination: According to our predicted 12 antigenic epitopes, the dominant combination and series are carried out, and the gene synthesis is counted as Em.

[0055] 2. Construction of the eukaryotic expression vector: the obtained recombinant HCV multi-epitope vaccine gene sequence mcg targeting the Chinese HLA gene frequency was cloned into the eukaryotic expression vector pEGFP-N1 with the green fluorescent protein tag, and passed through liposome Transfect COS7 cells, detect its expression by RT-PCR and western blot, and directly observe the distribution and localization of mcg-EGFP fusion protein in the cells under a fluorescent microscope. Results The constructed eukaryotic expression vector pEGFP-mcg was successfully expressed in COS-7 cells. In the em...

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Abstract

The invention relates to the technology of bioinformatics and immunology and provides a newly found hepatitis C virus epitope. The sequence of the hepatitis C virus epitope is an epitope polypeptide P7(774-782)AAWYIKGRL. The invention also relates to the application of the epitope polypeptide to the preparation of medicaments for treating hepatitis C virus and to the preparation of hepatitis C virus vaccines. In-vivo and in-vitro experiments show that that the epitope has immunogenicity.

Description

technical field [0001] The invention relates to bioinformatics and immunology technology, predicts the newly discovered antigenic epitope of hepatitis C virus, and preliminary in vivo and in vitro experiments prove that the antigenic epitope has immunogenicity. Background technique [0002] Hepatitis C virus (HCV) is one of the main pathogens that cause chronic liver disease. There are about 170 million to 200 million HCV infected people in the world. The HCV infection rate of the Chinese population is about 3.2%. It is estimated that there are more than 40 million infected people nationwide. After HCV infection, about 50% -85% turn into chronic hepatitis, of which 20% -30% develop into liver cirrhosis, and some turn into hepatocellular carcinoma (HCC), which seriously endangers human health and has become a global and severe public health problem. Hygiene issue. So far, there is still a lack of ideal antiviral treatment measures, and interferon treatment is not satisfactor...

Claims

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Application Information

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IPC IPC(8): C07K7/06A61K38/08A61K39/29A61P1/16A61P31/14
Inventor 贾战生李端潘蕾周云
Owner FOURTH MILITARY MEDICAL UNIVERSITY
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