<18>O on-line marked protein quantitative analysis platform, and operation method thereof

A technology of quantitative analysis and operation method, which is applied to the 18O online labeled protein quantitative analysis platform and its operation field, can solve the problems of cumbersome and time-consuming operation, low labeling efficiency, etc., and achieves improved analysis throughput, high labeling time, and automation. high effect

Active Publication Date: 2014-06-25
DALIAN INST OF CHEM PHYSICS CHINESE ACAD OF SCI
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

At present, there are mainly two reasons for restricting the further promotion of this method: 1. 18 O marking is less efficient: 18 O labeling is mainly divided into one-step method and two-step method. The one-step method is relatively simple to operate, and only needs to dissolve the sample in 18 O solution can be used for enzymatic hydrolysis, but the labeling efficiency of this method is very low; the labeling efficiency of the two-step method is higher than that of the one-step method, but the operation is cumbersome and time-consuming. 16 O solution for enzymolysis, desalination after enzymolysis, evaporated to dryness, evaporated peptides redissolved in 18 Incubation in a solution of O
2, 18 There is a backcrossing problem with the O mark, which is performed using traditional methods 18 After O labeling, since the protease still exists in the solution, once encountered 16 O solution, marked on 18 The peptide of O will be backcrossed to 16 O (Journal of Proteome Research 2009, 8, 2140-2143; Journal of Proteome Research 2009, 8, 2157-2163)

Method used

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  • &lt;18&gt;O on-line marked protein quantitative analysis platform, and operation method thereof
  • &lt;18&gt;O on-line marked protein quantitative analysis platform, and operation method thereof
  • &lt;18&gt;O on-line marked protein quantitative analysis platform, and operation method thereof

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Experimental program
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Effect test

Embodiment 1

[0026] Such as figure 1 As shown, the analysis device consists of a syringe pump 1, a sampling needle 2, a column thermostat 3, an enzyme reactor 4, a first four-way or six-way valve 5, a peptide trapping column 6, a polypeptide separation column 7, a second It consists of a four-way or six-way valve 8, a liquid chromatography pump 9, and a mass spectrometer detector 10. The analysis device is characterized in that the protein is enzymatically hydrolyzed, 18 O mark, integration of peptide separation system. The operation is as follows: adjust the flow rate through the syringe pump 1, inject the protein sample in the injection needle 2 into the enzyme reactor 4 (the enzyme reactor 4 is placed in the column oven 3), and after incubation for 1 hour, the enzyme The peptide segment after enzymolysis in the reactor 4 is injected onto the trapping column 6 through the first four-way or six-way valve 5, and the first four-way or six-way valve 5 and the second four-way or six-way val...

Embodiment 2

[0028] use 18 O online labeling method for analysis of bovine serum albumin. 0.1mg / mL bovine serum albumin solution (dissolved in H 2 16 O in 50mM NH 4 HCO 3 Middle) Load the sample onto the enzyme column and incubate for one hour. After incubation, use H 2 16 O in 50mM NH 4 HCO 3 Samples were eluted and analyzed using MALDI-TOF; similarly, 0.1 mg / mL bovine serum albumin solution (dissolved in H 2 18 O in 50mM NH 4 HCO 3 Middle) Load the sample onto the enzyme column and incubate for one hour. After incubation, use H 2 18 O in 50mM NH 4 HCO 3 Samples were eluted and analyzed using MALDI-TOF. The MALDI-TOF analysis results of the two samples are as follows figure 2 shown.

Embodiment 3

[0030] adopt respectively 18 O online labeling and two-step method reported in the literature for the analysis of bovine serum albumin. 0.1mg / mL bovine serum albumin solution (dissolved in H 2 18 O in 50mM NH 4 HCO 3 Middle) Load the sample onto the enzyme column and incubate for one hour. After incubation, use H 2 18 O in 50mM NH 4 HCO 3 The samples were eluted and analyzed using MALDI-TOF 18 O labeling efficiency; to another 0.1mg / mL bovine serum albumin solution (dissolved in H 2 16 O in 50mM NH 4 HCO 3 (Middle) was added trypsin (the ratio of trypsin to protein was 1:25) for enzymolysis overnight, and then the enzymolysis solution was desalted and evaporated to dryness, and the evaporated sample was redissolved in H 2 18 O in 50mM NH 4 HCO 3 (containing 20% ​​acetonitrile by volume), then add trypsin (the ratio of trypsin to protein is 1:25) and incubate for 24 hours, and finally use MALDI-TOF to 18 The labeling efficiency of O was analyzed. Two methods for ...

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Abstract

The invention relates to a <18>O on-line marked protein quantitative analysis platform, and an operation method thereof. The <18>O on-line marked protein quantitative analysis platform is a system integrating protein on-line enzymolysis, <18>O on-line marking and polypeptide separation and detection. The <18>O on-line marked protein quantitative analysis platform comprises an injection pump, a sampling needle, a column oven, an enzyme reactor, a switch valve, a peptide fragment capture column, a liquid phase chromatography pump, a polypeptide separation column and a mass spectrometry detector. A protein sample is firstly loaded to the enzyme reactor through the injection pump to carry out incubation; <18>O marking can be carried out at the same time with enzymolysis; and the <18>O marked peptide fragment after enzymolysis is enriched on-line and transferred into the polypeptide separation column for further separation, and finally is detected by the mass spectrometry detector. The <18>O on-line marked protein quantitative analysis platform integrates the protein on-line enzymolysis, <18>O on-line marking and polypeptide separation.

Description

Technical field: [0001] The present invention relates to a 18 O on-line labeled protein quantitative analysis platform and operation method thereof, 18 O On-line labeled protein quantitative analysis platform is an online enzymatic hydrolysis of proteins, 18 O On-line labeling, peptide separation and detection system. Background technique: [0002] The main separation technique of protein mixture in the initial stage of proteomics is two-dimensional gel electrophoresis (2DE). The protein mixture is fully separated by first-dimensional isoelectric focusing electrophoresis and second-dimensional size exclusion electrophoresis, and then stained by Coomassie brilliant blue or silver. Staining allows the protein separated on the gel to develop color, and the color intensity represents the corresponding protein content in the sample. The relative content of corresponding proteins in the two samples can be obtained by comparing the color intensity of the proteins at the same pos...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): G01N30/88
Inventor 张丽华张珅周愿袁辉明杨开广张玉奎
Owner DALIAN INST OF CHEM PHYSICS CHINESE ACAD OF SCI
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