Identification and Application of Plant Anther-Specific Expression Promoter ptaasg050
An anther-specific, promoter-based technology, which is applied to isolated DNA. The application field of this DNA can solve the problems of gene silencing with high homology of promoter sequences, insignificant improvement in time and space of target gene expression, and long waiting time, etc.
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Embodiment 1
[0042] Example 1. Genome-wide expression profiling analysis of wheat anthers at different developmental stages and acquisition of anther expression contig at later stages of pollen development
[0043] Wheat anthers whose pollen was in meiosis, mononucleate, binucleate and trinucleate were collected, total RNA was extracted with Trizol (Invitrogen), treated with DNaseI (Promega), and then mRNA was purified (Ambion). The purified mRNA was subjected to reverse transcription (Invitrogen), ultrasonic fragmentation (Fisher), library preparation (illumina) and amplification (illumina), and finally a sequencing reaction on an illumina machine.
[0044] The results of high-throughput sequencing of the wheat transcriptome were first assembled by Trinity software, and the resulting spliced sequences were further removed from redundancy and similarity clustering. For the expression change analysis of the spliced transcript contig, the high-throughput sequencing sequence in each sampl...
Embodiment 2
[0046] Embodiment 2.RT-PCR verifies the tissue expression specificity of TaASG050 gene
[0047] Wheat is an allohexaploid composed of three sets of genomes A, B, and D. The average copy number of genes is 2.8, of which nearly half of the genes (46%) have 3-4 copies, and 12% of the genes have 1 -2 copies, 42% of genes had ≥5 copies. Starting from the sequence of comp181319_c0_seq7 (as shown in SEQ ID NO:1), using the sequencing information of common wheat published by CerealsDB and IWGSC (International Wheat Genome Sequencing Consortium), and the wheat ancestor Triticum urartu published on Nature in 2013 , A genome donor) and the sequencing information of Aegilops tauschii (D genome donor) were electronically cloned, and three TaASG050 genes were obtained, named TaASG050-1, TaASG050-2 and TaASG050-3, among which comp181319_c0_seq7 Corresponding to TaASG050-1. The cDNA sequences of the three TaASG050 genes are shown in SEQ ID NO: 2, SEQ ID NO: 3 and SEQ ID NO: 4 respectively, a...
Embodiment 3
[0057] Example 3. Obtaining of TaASG050-1, TaASG050-2 and TaASG050-3 gene promoter sequences and analysis of cis-elements
[0058] Starting from the cDNA sequences of TaASG050-1, TaASG050-2 and TaASG050-3 genes, using the sequencing information of common wheat published by CerealsDB and IWGSC (International Wheat Genome Sequencing Consortium), and the wheat ancestor of wheat Uraltu ( The sequence information of Triticum urartu (genome donor A) and Aegilops tauschii (genome donor D) were electronically cloned to obtain the promoters of TaASG050-1, TaASG050-2 and TaASG050-3 genes, which were named TaASG050 -1 promoter, TaASG050-2 promoter and TaASG050-3 promoter have lengths of 2015bp, 2000bp and 2198bp respectively, and their sequences are shown in SEQ ID NO:5, SEQ ID NO:6 and SEQ ID NO:7 respectively.
[0059] Using the PlantCARE database and the PLACE database, cis-element analysis was performed on the TaASG050-1 promoter, TaASG050-2 promoter and TaASG050-3 promoter. Such as...
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