MicroRNA marker group and its application in the preparation and evaluation of breast cancer chemosensitivity kit
A kit and sensitive technology, applied in the field of genetic testing, can solve the problems of difficulty in screening the main evaluation markers and difficult evaluation of the effect, and achieve the effect of large development value, improved accuracy, and important clinical significance.
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Embodiment 1
[0031] 1. From 2009 to 2013, a total of 190 breast cancer tissue samples (breast cancer puncture specimens before chemotherapy and breast cancer surgical resection specimens after chemotherapy, in a paired relationship), of which 119 were from Qilu Hospital of Shandong University (randomly divided into two groups: primary screening and verification Sample), in order to exclude regional differences, another 71 cases of breast cancer patients from Liaocheng People's Hospital. According to the effect of neoadjuvant chemotherapy, 190 patients were graded according to the MP (Miller Payne) treatment response evaluation. Among them, the effect of chemotherapy in grade 1 and grade 2 was poor (that is, there was no response to chemotherapy or the reduction of tumor cells after chemotherapy was less than 30%), which was called chemotherapy. Drug-resistant group; grades 3, 4, and 5 have better chemotherapy effects (tumor cells are reduced by 30-90% after chemotherapy, and more than 90% a...
Embodiment 2
[0043] 1. Extraction of miRNA in breast cancer specimen tissue: Bioteke company's miRNA extraction kit in paraffin-embedded tissue.
[0044] (1) Tissue section: Cut the wax block of the breast cancer specimen into 10 slices of 4 μm;
[0045] (2) Dewaxing and dehydration of slices: put the tissue slices into a 65°C incubator for 1 hour to melt the wax, and then soak in 75%, 85%, 95% and 100% ethanol in xylene;
[0046] (3) Section nuclear staining: place the section in the newly prepared hematoxylin solution for 40-60s, gently rinse and dry;
[0047] (4) Tissue picking: Operate a 1ml syringe under a microscope to gently scrape off the cancer tissue in the section with its needle tip, and place it in a mixture of 240 μl PTL solution and 10 μl proteinase K;
[0048] (5) miRNA extraction:
[0049] 1) Water bath at 55°C and 80°C for 10 minutes each.
[0050] 2) Add 750 μl of Lysis Buffer MRL (purchased from Bioteke Company) to mix well, and let stand at room temperature for 3 mi...
Embodiment 3
[0073] Using GraphPad Prism 5 software, the receiver operating characteristic curve (receiver operating characteristic curve, ROC curve) analysis was performed on the specificity and sensitivity of the six miRNAs in distinguishing chemotherapy effects. In 60 primary screening cases, the results showed that miR-23a-3p, miR-200c-3p, miR-214-3p miR-638 and miR-451a (area under the curve AUC = 0.656, 0.727, 0.660, 0.658, 0.729, P All image 3 A; while the analysis results of miR-23b-3p showed that its AUC=0.638 (P>0.05), the difference was not statistically significant, such as Figure 4 shown.
[0074] Therefore, after removing miR-23b-3p, the remaining 5 indicators were used to construct the risk formula of chemotherapy resistance using the Logistic regression model:
[0075] Risk score=(0.782×expression of miR-23a-3p)-(3.968×expression of miR-638)+(0.361×expression of miR-200c-3p)+(5.848×expression of miR-214-3p)-(2.598 ×expression of miR-451a)+0.562.
[0076] According to thi...
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