Method for high-effective construction of T-carrier based on polymerase chain reaction

A carrier and high-efficiency technology, which is applied in the direction of using vectors to introduce foreign genetic material, recombinant DNA technology, etc., can solve the problems of high non-recombination background of enzymes, low enzyme digestion efficiency, low cloning efficiency, etc., and achieve simple and easy experimental steps, cloning The effect of high efficiency and simple method

Inactive Publication Date: 2011-01-26
TIANJIN MEDICAL UNIV
View PDF0 Cites 1 Cited by
  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0005] 1. High non-recombinant background and low cloning efficiency
[0006] The preparation of T vectors by terminal transferase or Taq enzyme is sometimes due to the low efficiency of adding T to the enzyme, and the ends of some vector molecules are not modified at all, resulting in the existence of blunt-ended linear plasmids with no T added at both ends. It is difficult to avoid the loop of the vector itself during the ligation process. Sometimes there is also the problem that the sequences at both ends of the linear plasmid are partially deleted during the T-tailing process
The method of preparing T vectors with specific restriction endonucleases such as XcmI, AhdI and other enzymes also often produces incomplete digestion due to relatively low digestion efficiency, and the problem of excessive non-recombination background in the cloning process
Therefore, the key problem in the construction of T vector is the high non-recombination background caused by the low efficiency of the enzyme, which leads to low cloning efficiency.
[0007] 2. There are limitations of endonucleases
But the premise of adopting this method is that the starting vector itself does not have recognition sites such as XcmI, AhdI (or their isozymes), otherwise mutagenesis must first be carried out to make this site disappear, and the more such sites, The mutagenesis process is more cumbersome, time-consuming and labor-intensive

Method used

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
View more

Image

Smart Image Click on the blue labels to locate them in the text.
Viewing Examples
Smart Image
  • Method for high-effective construction of T-carrier based on polymerase chain reaction

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0031] Example 1: Preparation of T vector pUC18-T

[0032] 1. Preparation of plasmid pUC18-V

[0033] According to the sequence of plasmid pUC18, a pair of oligonucleotide sequences were designed as:

[0034] pUC-oligo-s: 5' AATT CGAGCTCGGTACCCGGG GATATC CCTCTAGAG-3';

[0035] pUC-oligo-as: 5'- TCGA CTCTAGAGG GATATC CCCGGGTACCGAGCTCG-3'.

[0036] The introduced oligonucleotide sequences all contain (1) the EcoRI recognition site, marked with italics; (2) the EcoRV recognition site, marked with a single line; in addition, the 5' ends of the two oligonucleotides contain EcoRI, respectively Cut ends "AATT" and SalI cut ends "TCGA".

[0037] The oligonucleotide fragments were phosphorylated separately, and both reaction systems were 20 μL, containing 1U T 4 DNA Kinase, 1×T 4 DNA Kinase Buffer, pUC-oligo-s or pUC-oligo-as 5μmol / L, the final concentration of ATP is 1mmol / L. After 60min at 37℃, the two systems were mixed, and T was inactivated at 70℃ for 10min. 4 DN...

Embodiment 2

[0047] Example 2: Efficiency Detection of T Vector pUC18-T

[0048] Use Taq DNA polymerase to amplify the minimal promoter of chemokine receptor CXCR4, and perform ligation reaction between the CXCR4 PCR product and the pUC18-T vector. The 10 μL ligation system is as follows: 25ng PCR product, 50ng T vector, 3U T 4 DNA ligase, ligated for 16 hours at 16°C. The above-treated ligation product was transformed into JM109 strain. After picking 20 clones and culturing them, the plasmids were extracted and digested with EcoRI (one EcoRI site on each side of the A-T cloning site) to identify the presence or absence of the insert. The results showed that the transformation efficiency of T vector clones was not lower than 5×10 5 cfu / mg DNA, all clones picked contain inserts. The recombinant vectors were named pUC18-T / CXCR4 respectively.

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to view more

PUM

No PUM Login to view more

Abstract

The invention discloses a high-effective construction method for a T carrier based on a PCR method. The invention is that a pair of oligodeoxynucleotide sections which contain specific restriction enzyme sites are introduced into an initiation carrier (such as pUC18); the restriction enzyme site is characterized in that the corresponding enzyme (such as EcoRV) can generate blunt end, and the baseof fro and post tangency point are respectively T and A; the initiation carrier is linearized under the function of the enzyme which is then used as a PCR template; designed primers produce two single chain through single-primed PCR or asymmetric PCR amplification, the two single-chains are annealed so as to form the T carrier. The method for preparing the T carrier is simple and fast; the produced T carrier can effectively clone PCR products containing tail A, and the non-reconstitution background is nearly zero.

Description

technical field [0001] The invention relates to a method for constructing a vector in the field of genetic engineering, in particular to a method for constructing a high-efficiency T vector. Background technique [0002] T vector is a linear vector for direct cloning of PCR products, and A-T cloning technology has proved to be extremely valuable for cloning of PCR products. The principle of this method is to use Taq DNA polymerase to add an additional template-independent dA base to the 3' end of the amplified product. This dA is just paired with the dT at the 3' overhang of the linear T vector, and the ligation is performed directly and efficiently. Cloning without restriction endonuclease digestion process. [0003] At present, there are two kinds of classical T vector construction methods. The first method is to first linearize the plasmid with an endonuclease that produces a blunt-end cut point such as SmaI or EcoRV, and then use a terminal transferase or a Taq enzyme ...

Claims

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to view more

Application Information

Patent Timeline
no application Login to view more
Patent Type & Authority Patents(China)
IPC IPC(8): C12N15/66
Inventor 李晓霞王宝利郭刚张镜宇钟启平訾自强张瑞
Owner TIANJIN MEDICAL UNIV
Who we serve
  • R&D Engineer
  • R&D Manager
  • IP Professional
Why Eureka
  • Industry Leading Data Capabilities
  • Powerful AI technology
  • Patent DNA Extraction
Social media
Try Eureka
PatSnap group products