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Fluorescent quantitative PCR (Polymerase Chain Reaction) detection kit and detection method of HBV (Hepatitis B Virus) and TP (Treponema Pallidum) of donor corneas

A technology for detection kits and kits, which can be used in the determination/testing of microorganisms, biochemical equipment and methods, fluorescence/phosphorescence, etc., and can solve problems such as low sensitivity, PCR false positive pollution, and difficulty in improving quantitative accuracy. High quantitative accuracy and the effect of avoiding cross-contamination

Active Publication Date: 2010-10-06
SHANDONG EYE INST
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

The serum immunology method can be completed by the laboratory. This method is cheap and easy to operate, but has low sensitivity and is prone to false negatives. It can be used as a primary screening method
Moreover, this method cannot be implemented when donor blood samples cannot be obtained; genetic testing can be divided into qualitative testing and quantitative testing, and the current research development trend is the rapid development of new technologies that can be quickly and quantitatively tested with low cost and easy to promote
Although the polymerase chain reaction technology has been widely used in nucleic acid analysis, the false positive pollution and quantitative accuracy of ordinary PCR have always troubled people.
It relies on the post-processing of various types of PCR, and these processing processes can easily cause a large number of PCR products to fly into the air, making the false positive contamination of PCR the biggest problem in large-scale clinical applications
On the other hand, the quantification of all these methods is carried out for the final product of PCR, and the platform effect of PCR greatly interferes with the correlation between the number of original templates of PCR and the final product, making it difficult to improve the quantitative accuracy

Method used

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  • Fluorescent quantitative PCR (Polymerase Chain Reaction) detection kit and detection method of HBV (Hepatitis B Virus) and TP (Treponema Pallidum) of donor corneas
  • Fluorescent quantitative PCR (Polymerase Chain Reaction) detection kit and detection method of HBV (Hepatitis B Virus) and TP (Treponema Pallidum) of donor corneas

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0046] Example 1 Donor corneal HBV virus detection:

[0047] 1. DNA extraction from donor eyeball conjunctival tissue and construction of positive working standards:

[0048] (1) Take 5 mg of the conjunctival tissue of the donor eyeball, put the tissue block into a centrifuge tube and cut it into pieces, and add 180 μL of tissue lysate. Add 20μL proteinase K, mix well, and incubate at 56℃ until the tissue is completely lysed;

[0049] (2) Add 200μL of purified lysate, vortex the shaker for 15s to mix, and incubate at 70°C for 10min. Add 200μL of absolute ethanol to the sample, vortex the shaker for 15s to mix;

[0050] (3) Transfer the sample from step 2 to the filter column, close the lid and centrifuge at 8000 rpm for 1 min. Discard the waste liquid in the filter column, add 500 μL of eluent 1, and centrifuge at 8000 rpm for 1 min;

[0051] (4) Discard the waste liquid in the filter column, add 500 μL of eluent 2, and centrifuge at 12000 rpm for 3 min. Discard the waste liquid in ...

Embodiment 2

[0066] Example 2 TP detection of donor cornea:

[0067] 1. Extraction of DNA from donor eyeball conjunctival tissue and construction of positive working standards: The specific steps are the same as the extraction of donor eyeball conjunctival tissue DNA in Example 1.

[0068] Construct a plasmid containing TP gene (pUC57-TP) as a positive working standard. The positive working standard contains the target sequence amplified by the TP forward and reverse primers. In addition, an extra sequence is added to each side of the target sequence to make it closer to the structure of the actual test sample to ensure the difference between the actual test sample Consistency of amplification efficiency.

[0069] Use the Promega PureYield plasmid miniprep system kit to extract the TP-positive working standard quality pellets, and then use an ultraviolet spectrophotometer to compare color at 260nm and 280nm to obtain the purity and concentration of the TP-positive working standard. According to...

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PUM

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Abstract

The invention relates to a fluorescent quantitative PCR detection kit and a detection method of HBV and TP of donor corneas. The kit comprises a DNA (deoxyribonucleic acid) extraction reagent, a DNA amplification reagent and positive working standards, wherein the DNA amplification reagent comprises a premix reagent, a 20X fluorescent probe reinforcing agent, forward and reverse HBV primers, an HBV fluorescent probe, forward and reverse TP primers, a TP fluorescent probe, distilled water of ribose-free nuclease and HBV and TP negative control and positive control; the positive working standards are pUC57-HBV plasmids containing destination sequences amplified by the forward and reverse HBV primers and a pUC57-TP plasmids containing destination sequences amplified by the forward and reverse TP primers. The invention realizes the complete closed-tube detection on donor conjunctiva tissue specimens and does not need PCR aftertreatment, and thereby, cross contamination is avoided; meanwhile, real-time detection is adopted, and an obtained Ct value and the original template number are completely in linear correlation; the quantitative accuracy rate is extremely high, and the relative error is about 50 percent, and thereby, the invention is enough to adapt to the demands of clinical nucleic acid quantification.

Description

Technical field [0001] The invention belongs to the field of molecular biology technology for detecting the infection of donor corneal pathogens, and specifically relates to a rapid detection kit and a detection method for the hepatitis B virus (HBV) and Treponema pallidum (TP), which are the major pathogens of the donor cornea. Background technique [0002] The biosafety of eye banks in my country is extremely poor, and there is no problem of controlling iatrogenic infections of the donor cornea. Because the data on the whole body condition of the eye bank donor is incomplete, and the accidental death of the donor does not even have the medical data of the whole body condition, there is a great risk of infection of various pathogens, so when the donor cornea is very scarce, it is necessary to On the premise of ensuring safety, try to maximize the clinical use of the donor cornea. At present, the main problem of our country's eye bank is how to establish a set of methods for rap...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/70C12Q1/68C12Q1/04G01N21/64
Inventor 谢立信陈鹏
Owner SHANDONG EYE INST
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