Gene 03g induced to express by tissue culture and preparation method and application
A transgenic rice, separation technology, applied in the field of plant genetic engineering, to achieve the effect of high-quality stress resistance and rich detection methods
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Embodiment 1
[0037] A method for preparing the expression sequence of the gene 03g induced by tissue culture, the steps of which are:
[0038] To the gene (AK102606, http: / / www.ncbi.nlm.nih.gov / nuccore / 32987815) required for the present invention, mainly by RT-PCR method (referring to: J. Sambrook, EF Fritsch, T Man Written by Niatis, translated by Huang Peitang, Wang Jiaxi, etc., Molecular Cloning Experiment Guide (Third Edition), Beijing, Science Press, 2002 edition) amplified to obtain a specific sequence of 03g gene:
[0039] 1) A, extraction of RNA from various periods in the rice tissue culture process [the buds grown after 7 days of sub-induction (callus has not yet been induced); B, the buds grown after 11 days of seed induction; C, the buds grown after 11 days of seed induction The callus that grows after 2 days; D, the callus that has been subcultured once; E, the callus that is in the differentiation stage (differentiated buds grow out); F, the seedling differentiated from the c...
Embodiment 2
[0045] Application of a gene 03g induced by tissue culture in the detection of DNA methylation in (Zhonghua 11 and Minghui 63 transgenic rice):
[0046] The bisulfate DNA methylation sequencing method was used in 03g expression materials (Zhonghua 11 materials produced by tissue culture, see Genetic Resources Table 1) and non-expressing materials (wild-type Zhonghua 11, see Genetic Resources Table 1 ) to detect its DNA methylation, the specific implementation method is as follows:
[0047] 1) Genomic DNA was extracted from the material using the CTAB method (Zhang et al., genetic diversity and differentiation of indica an japonica rice detected by RFLP analysis, 1992, Theor Appl Genet, 83, 495-499). Genomic DNA of each material was treated with bisulfate, using a kit purchased from QIANGEN (EpiTect Bisulfite Kit, item number: 59104). For specific methods, refer to the instructions for use.
[0048] 2) Using the DNA obtained in 1) as a template, design primers for DNA methylat...
Embodiment 3
[0054] Application of a gene 03g induced by tissue culture in the detection of histone modification (transgenic rice Zhonghua 11 and Minghui 63):
[0055] Using the method of chromatin immunoprecipitation to detect the histone modification status of 03g, the specific operation method is as follows:
[0056] 1) Material: The material with 03g expression is the Zhonghua 11 material produced by tissue culture (see Genetic Resources Table 1), and the material without 03g expression is the wild-type Zhonghua 11 material (see Genetic Resources Table 1).
[0057] 2) Take the seedlings grown for 14 days and submerge in extraction buffer 1 containing 1% (volume / volume) formaldehyde (0.4M sucrose, 10mM Tris-HCl pH8, 10mM MgCl 2 5mM β-mercaptoethanol, protease inhibitor), vacuumize for 30 minutes, then add 2.5ml of 2M glycine, and continue vacuuming for 5 minutes. Then take out the material, wash it twice with distilled water, blot it dry, put it into liquid nitrogen to freeze it quick...
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