Reverse transcription loop-mediated isothermal amplification kit for detecting pestedes petits ruminants viruses

A technology of Peste des petits ruminants and ring-mediated isothermal, which is applied in the field of microbial detection, can solve the problems of high reagent cost, easy confusion, and laboratory pollution, and achieve the effect of simple operation, rapid acquisition, and low technical level

Inactive Publication Date: 2016-03-16
GUANGXI VETERINARY RES INST
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

Since Peste des petits ruminants virus and rinderpest virus of the same genus have a common antigen in serum detection, the neutralization test also has a certain degree of cross-reaction, so the two are easily confused; competition ELISA is also time-consuming and requires the presence of live virus
Viral nucleic acid detection methods are mainly common RT-PCR method and fluorescent RT-PCR method. The detection sensitivity of the latter is higher than that of the former. Although these two methods are faster and more accurate than virus isolation and identification and serological detection methods, RT-PCR requires expensive PCR instrument, and agarose gel electrophoresis is required for the judgment of the results, which may easily cause laboratory contamination and lead to false positive results. More expensive than ordinary PCR machines, and the cost of reagents is higher, which is not conducive to grass-roots detection and on-site batch detection

Method used

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  • Reverse transcription loop-mediated isothermal amplification kit for detecting pestedes petits ruminants viruses
  • Reverse transcription loop-mediated isothermal amplification kit for detecting pestedes petits ruminants viruses
  • Reverse transcription loop-mediated isothermal amplification kit for detecting pestedes petits ruminants viruses

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Effect test

Embodiment 1

[0048] Embodiment 1 RT-LAMP detection

[0049] 1. Preparation of materials

[0050] Peste des petits ruminants virus, foot-and-mouth disease virus, bluetongue virus, canine distemper virus, bovine viral diarrhea virus, bovine coronavirus, parvovirus, transmissible gastroenteritis virus, commercially available vaccines or preserved by Guangxi Veterinary Research Institute. Enzyme mixture EM and fluorescent visual reagents were purchased from Beijing Lanpu Biotechnology Co., Ltd., and viral genome DNA / RNA extraction kits were purchased from Kangwei Century Biotechnology Co., Ltd.

[0051] 2. Design and synthesis of RT-LAMP primers

[0052] According to the N gene sequence of Peste des petits ruminants virus in GenBank, a set of RT-LAMP primers was designed by the primer-assisted design software PrimerExplorerV4 software, wherein F3 and B3 are outer primers, FIP and BIP are inner primers, and LF and LB are loop primers. F3 and B3 are primers for RT-PCR detection of Peste des pe...

Embodiment 2

[0082] The specificity result of embodiment 2RT-LAMP detection method

[0083] 1 strain of Peste des petits ruminants virus, 7 strains of control virus strains and water control were amplified by RT-LAMP, and the results were as follows figure 1 As shown, the reaction tube of Peste des petits ruminants virus showed a rising curve of turbidity at about 28 minutes, which was a positive result, and the reaction tubes of the 7 strains of the control strain and the water control reaction tube showed no amplification, which was a negative result.

Embodiment 3

[0084] The sensitivity result of embodiment 3RT-LAMP detection method

[0085] The initial concentration of the original RNA of Peste des petits ruminants virus was 9.8×10 0 ng / μL, after 10-fold serial dilution, RT-LAMP and RT-PCR amplification were carried out at the same time, the results were as follows figure 2 with image 3 As shown, the results show that the detection limit of RT-LAMP method is about 9.8×10 -4 ng / μL, while the detection limit of RT-PCR method is 9.8×10 -3 ng / μL.

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Abstract

The invention discloses a reverse transcription loop-mediated isothermal amplification (RT-LAMP) kit for detecting pestedes petits ruminants viruses (PPRVs). The kit comprises an RT-LAMP primer, a 2X reaction buffer solution, an enzyme mixture (EM), a fluorescent visual detection reagent, ultrapure water and a reaction template, wherein the RT-LAMP primer includes outer primers F3 and B3, inner primers FIP and BIP and loop primers LF and LB. The detection kit is mainly used for detecting whether the PPRVs exist in lesion tissues suspiciously infected with the PPRVs. Specific detection and sensitivity detection prove that the RT-LAMP kit provided by the invention can monitor a reaction in real time and quantitatively detect a copy number of the PPRVs, a detection result is obtained quickly and accurately, and the convenience is brought for simply and quickly detecting the PPRVs.

Description

technical field [0001] The invention relates to the technical field of microbial detection, in particular to a rapid, visualized and real-time quantitative detection of Peste des petits ruminants virus (PPRV) reverse transcription loop-mediated isothermal amplification kit and its application. Background technique [0002] Peste des petits ruminants (PPR) is an acute, virulent, contagious disease caused by Peste des petits ruminants virus (PPRV), which mainly infects small ruminants such as goats and sheep, especially goats are highly susceptible, wild animals Occurs by chance, and the infection rate and mortality rate are as high as 100% and 90%. OIE once regarded the case as a Class A animal infectious disease that must be reported, and my country listed it as a Class I animal disease. Once discovered, urgent and severe measures must be taken to control and eradicate it. Large-scale outbreaks of epidemics in Laos, Bangladesh, India, Nepal, Russia, Pakistan, Myanmar and ot...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/70C12Q1/68
CPCC12Q1/6844C12Q1/70
Inventor 李军冯世文彭昊潘艳陶立马春霞陈泽祥杨威胡帅钟舒红禤雄标谢永平谢宇舟柳锋许力干
Owner GUANGXI VETERINARY RES INST
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