Phenylketonuria detection primer group, kit and gene mutation detection method
A technology of phenylketonuria and primer set, which is applied in the field of gene biology, can solve the problems of blind spots, lack of SPR gene detection sites, and insufficient coverage, and achieves complete coverage, high uniformity, and little mutual interference between primers. Effect
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Embodiment 1
[0022] Embodiment 1, the primer group that detects phenylketonuria pathogenic gene
[0023] The inventor designed primers for the phenylketonuria pathogenic genes PAH, PTS, GCH1, QDPR, PCBD1, and SPR based on these 6 genes and their upstream and downstream splicing sites of about 10 bp. After extensive screening and optimization, the primers were optimized 83 pairs of specific primers constitute a multiplex PCR primer set system, and their nucleotide sequences and mixing ratios are shown in Table 1.
[0024] Table 1. Primer sequences and mixing ratios for detecting phenylketonuria pathogenic genes
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Embodiment 2
[0030] Example 2, Construction of sequencing library for detection of pathogenic genes of phenylketonuria
[0031] Using the primer set provided in Example 1, a sequencing library construction method based on the Ion Proton platform is provided for detecting pathogenic gene mutations of phenylketonuria.
[0032] 1. DNA extraction from samples to be tested
[0033] Take 0.1-0.2 mL of peripheral blood samples (or 2-3 pieces of dried blood spots with a diameter of about 6 mm) to extract genomic DNA using MagPure Tissue&Blood DNA LQ Kit, and use Nanodrop2000 to perform purity testing and concentration of the extracted genomic DNA. The initial assessment, followed by verification of the integrity of the extracted genomic DNA by agarose gel electrophoresis,
[0034] 2. Multiplex PCR amplification reaction
[0035] Use the extracted genomic DNA as a template to perform multiple PCR reactions to amplify the target fragment. The 20 μL reaction system is: 200ng of genomic DNA of the s...
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