Looking for breakthrough ideas for innovation challenges? Try Patsnap Eureka!

Methods for increasing the efficiency of homology directed repair (HDR) in the cellular genome

A genome and genome sequence technology, applied in the field of improving the efficiency of homology-directed repair (HDR) in the cell genome, can solve the problem of low efficiency of genome modification

Pending Publication Date: 2019-10-01
BRISTOL MYERS SQUIBB CO
View PDF25 Cites 3 Cited by
  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0004] The efficiency of genome modification at a specific target location by the HDR process is relatively low in cells

Method used

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
View more

Image

Smart Image Click on the blue labels to locate them in the text.
Viewing Examples
Smart Image
  • Methods for increasing the efficiency of homology directed repair (HDR) in the cellular genome
  • Methods for increasing the efficiency of homology directed repair (HDR) in the cellular genome
  • Methods for increasing the efficiency of homology directed repair (HDR) in the cellular genome

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0074] Cold shock increases the frequency of homology-directed repair for gene editing in induced pluripotent stem cells

[0075] introduction

[0076] One of the most promising applications of clustered regularly spaced palindromic repeat (CRISPR) technology is its use to create genetic models of human disease. CRISPR technology can be used on induced pluripotent stem cells (iPSCs) isolated from normal individuals to study disease phenotypes, or on IPSCs derived from disease patients to revert putative disease-causing mutations back to wild type (1,2). The relative robustness of the CRISPR pathway compared with zinc finger nucleases (ZFNs) and transcription activator-like effector nucleases (TALENs) allows for the comparison of protein-coding mutations as well as empirical data generated by genome-wide association studies and other non-coding mutations. Testing becomes possible (3,4). Despite many successes, gene editing in iPSCs is challenged by the fact that homology-di...

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to View More

PUM

No PUM Login to View More

Abstract

In certain embodiments, the disclosure provides a method for increasing the efficiency of homology directed repair (HDR) in the genome of a cell, comprising: (a) introducing into the cell: (i) a nuclease; and (ii) a donor nucleic acid which comprises a modification sequence to be inserted into the genome; and (b) subjecting the cell to a temperature shift from 37 DEG C to a lower temperature; wherein the nuclease cleaves the genome at a cleavage site in the cell, and the donor nucleic acid directs the repair of the genome sequence with the modification sequence through an increased rate of HDR.

Description

[0001] CROSS-REFERENCE TO RELATED APPLICATIONS [0002] This application claims the benefit of US Provisional Application No. 62 / 437,042, filed December 20, 2016, which application is hereby incorporated in its entirety for all purposes. Background technique [0003] Various methods for DNA targeted cleavage of genomic sequences have been described in the art. Such targeted cleavage events can be used to induce targeted mutagenesis, induce targeted deletion of cellular DNA sequences, and facilitate targeted recombination at predetermined chromosomal loci. These methods typically involve the use of engineered cleavage systems to induce double-strand breaks (DSBs) or nicks in the target DNA sequence such that the DNA is broken through error-generating processes such as non-homologous end joining (NHEJ) or homology-directed repair (HDR). Repair of the break can result in gene inactivation or insertion of an exogenous sequence of interest. Cleavage can occur by using specific nu...

Claims

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to View More

Application Information

Patent Timeline
no application Login to View More
IPC IPC(8): C12N15/10C12N15/90C12N5/0735C12N5/074C12N5/0775C12N5/0789C12N5/0797C12N15/11
CPCC12N15/102C12N15/907C12N9/22C12N15/113C12N2310/20
Inventor J·N·费德郭齐G·A·敏泰
Owner BRISTOL MYERS SQUIBB CO
Who we serve
  • R&D Engineer
  • R&D Manager
  • IP Professional
Why Patsnap Eureka
  • Industry Leading Data Capabilities
  • Powerful AI technology
  • Patent DNA Extraction
Social media
Patsnap Eureka Blog
Learn More
PatSnap group products