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Detection probe of phaeocystis

A technology for detecting probes and Phaeocystis algae, which is applied in the field of oligonucleotide probes and specific probes, can solve the problems of large fluctuation of detection results, difficult operation, and small number of capture probes, and achieves convenient search. and realization, the effect of good probe applicability and high stability

Inactive Publication Date: 2005-08-31
SHANGHAI JIAO TONG UNIV
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Problems solved by technology

Its main disadvantages are: first, because the length of the capture probe is only 10-30 bp, the number of capture probes that can effectively distinguish close relatives of microalgae is very small; second, it is necessary to prevent RNA degradation during the entire detection process, However, various steps such as washing and antibody reaction can easily cause RNA degradation, so the operation is difficult and the test results fluctuate greatly

Method used

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  • Detection probe of phaeocystis
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Examples

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Embodiment

[0030] Example: Qualitative and quantitative detection of Phaeocystis using S1 enzyme protection analysis for rRNA and sandwich hybridization technology

[0031] In this example, the combination of S1 enzyme protection analysis technology and sandwich hybridization technology is used to realize the qualitative and quantitative detection of marine red tide organism Phaeocystis sp., and the steps are as follows:

[0032] 1.1 Search for specific regions of Phaeocystis rRNA and design and synthesis of S1 enzyme protection assay probes

[0033] By determining the 18S rRNA sequence of the ribosomal small subunit of Phaeocystis and comparing it with the rRNA sequences of other algae, it was found that the 210-280 region of the small subunit rRNA was different from other algae, and the sequence of this region was determined to be a characteristic sequence; The S1 enzyme protection analysis probe ZN_S1 was designed and synthesized according to the characteristic sequence: 5'-CGATTCGAGC...

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Abstract

A detecting probe of brown colpomenia for protecting and analyzing the S1 enzyme of said seaweed and detecting it by sandwich hybridization has mutually correlative three oligonucleotide probes including the S1 enzyme protecting and analyzing probe.

Description

technical field [0001] The invention relates to a group of oligonucleotide probes for algae detection, in particular to specific probes for qualitative and quantitative detection of Phaeocystis. It belongs to the field of nucleic acid detection. Background technique [0002] Phaeocystis sp. is a kind of poisonous algae, which can produce toxins with hemolytic effect. It belongs to Chrysophyta and Dinoflagellates. It has caused red tides many times in the southern waters of my country. There is a layer of soft gelatinous algae on the periphery of the algal spherical group, and the algae contain polysaccharides. When a large number of red tides are formed, the algae containing gelatin and sugar will be tightly attached to the gills of the fish, affecting the breathing and feeding of the fish. Cause fish to suffocate and die due to lack of oxygen; secondly, the huge biomass of the algae (especially at dawn and evening) can cause water hypoxia and cause disasters. Coupled with...

Claims

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Application Information

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IPC IPC(8): C12Q1/68
Inventor 李荣秀于志刚蔡青松米铁柱甄毓
Owner SHANGHAI JIAO TONG UNIV
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