Supercharge Your Innovation With Domain-Expert AI Agents!

Small molecule DNA adaptorprotein for restraining activity of endotoxin

A DNA molecule and aptamer technology, applied in the biological field, can solve problems such as the inability to guarantee high affinity and high specificity of aptamers, the short immunogenic half-life of binding proteins and easy degradation, and the insignificant biological activity of endotoxins. Achieve the effect of non-immunogenicity, high affinity, and not easy in vivo

Inactive Publication Date: 2011-04-06
ARMY MEDICAL UNIV
View PDF0 Cites 0 Cited by
  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

The strategy of targeting LPS has grasped the key link in the pathogenesis of sepsis. The corresponding preparations have achieved certain effects, and some have entered pre-clinical trials, showing good application prospects, but they have not yet been used in clinical practice.
At the same time, the above-mentioned preparations also have shortcomings to a certain extent: the specificity of the antibody determines that the antibody can only specifically bind to a certain bacterial endotoxin, and has no effect on other bacterial endotoxins; the heterogeneity of the antibody also limits its clinical application. application; there are contradictions between the immunogenicity of the binding protein and its short half-life, easy degradation, and long-term repeated medication; although some preparations have good application prospects, most of them are designed by computer or chemically synthesized, and there are unavoidable effects. The specificity is not high, the antagonistic effect is not strong and other shortcomings
A large number of experiments have proved that under such screening rounds and conditions, it is only possible to obtain aptamers that can bind to LPS, but the high affinity and high specificity of aptamers cannot be guaranteed. The bioactive effect of the toxin is not obvious

Method used

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
View more

Image

Smart Image Click on the blue labels to locate them in the text.
Viewing Examples
Smart Image
  • Small molecule DNA adaptorprotein for restraining activity of endotoxin
  • Small molecule DNA adaptorprotein for restraining activity of endotoxin
  • Small molecule DNA adaptorprotein for restraining activity of endotoxin

Examples

Experimental program
Comparison scheme
Effect test

experiment example 1

[0047] Experimental Example 1: Electrophoretic pattern after 12 rounds of screening of step d of the present invention

[0048] Such as figure 1 As shown, 1 is the blank control, only the original library; 2-10 is the schematic diagram after 12 rounds of screening of the original library and LPS; figure 1 It can be known that after 12 rounds of screening, the nucleic acid aptamer capable of binding to LPS was significantly enriched, and the electrophoresis showed an obvious single band.

experiment example 2

[0049] Experimental Example 2: Detection of Monocyte Nuclear Transcription Factor (NF-κB) Activity by ELISA

[0050] 1. Purpose: To verify the inhibitory effect of the obtained DNA aptamer on the activity of endotoxin, that is, the inhibitory effect on the activation of NF-κB in human monocytes stimulated by LPS.

[0051] 2. Method:

[0052] (1), apply conventional methods to isolate human peripheral blood mononuclear cells, and then cultivate 24 hours in RPMI 1640 culture fluid (Gibco company) containing 5% calf serum, and adjust the cell count to 2 × 10 6 cells / L, the purity of the cells detected by the Giemsa method was above 90%, and the survival rate of the cells identified by phthalein blue staining was 95%.

[0053](2), the experiment was divided into two groups: one group of cells were respectively stimulated with LPS 100ng / ml derived from Escherichia coli 055:B5 bacteria, E.coliLipidA (F583, Rd mutant) bacteria and Salmonella minnesota R595 (Rd mutant) bacteria; Gro...

experiment example 3

[0057] Experimental example 3: Detection of the content of inflammatory factors IL-1 and TNF-α in monocyte culture supernatant by ELISA method

[0058] 1. Purpose: To further verify the inhibitory effect of the obtained DNA aptamer on the activity of endotoxin in vitro, that is, the inhibition of the secretion of cytokines (playing a key role in sepsis caused by endotoxin) stimulated by LPS Effect.

[0059] 2. Method:

[0060] (1), apply conventional methods to isolate human peripheral blood mononuclear cells, and then cultivate 24 hours in the RPMI 1640 culture medium (Gibco company) of cold 5% calf serum, and adjust the cell count to be 2 × 10 6 cells / L, the purity of the cells detected by the Giemsa method was above 90%, and the survival rate of the cells identified by phthalein blue staining was 95%.

[0061] (2), the experiment was divided into two groups: one group of cells were respectively stimulated with LPS 100ng / ml derived from Escherichia coli 055: B5 bacteria, E...

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to View More

PUM

PropertyMeasurementUnit
diameteraaaaaaaaaa
Login to View More

Abstract

The invention provides a small molecule DNA adaptorprotein for restraining the activity of endotoxin and a preparation method thereof. The adaptorprotein is a single chain DNA molecule, characterized in that the nucleotide sequence of its DNA molecule is 5'-GCGTCCACTCCCAGCCGCTCACTAGTTTCTGCGTGGGTGG-3'. The adaptorprotein is obtained by the steps of the establishment of a single chain DNA library, the expansion of the library, storage, the recycling of products of the expansion, twelve rounds of SELEX screening, the cloning with adaptorprotein of LPS affinity and the sequencing. The method provided by the invention can conveniently and accurately acquire the small molecule DNA adaptorprotein which can restrain the activity of endotoxin, and facilitates the mass preparation of the adaptorprotein. The adaptorprotein has the advantages of wide adaptability, non-immunogenicity, strong tissue permeability, little possibility of degrading in human body and easy storage and transportation. The invention can notably restrain the biological activity of endotoxin, provides a novel agonist to prevent and treat sepsis, and lays the foundation for developing novel antiendotoxin medicine.

Description

(1) Technical field [0001] The invention relates to the field of biotechnology, in particular to a small molecule DNA aptamer capable of inhibiting endotoxin activity and a preparation method thereof. (two), background technology [0002] Sepsis is a common complication after severe trauma, shock, and major surgery. Further development can lead to septic shock, multiple organ dysfunction syndrome, etc., and has become an important cause of death in clinical critically ill patients. So far, there is still no special treatment, and the mortality rate remains high. It is one of the difficult and hot issues in the research of trauma surgery and related fields. Studies have shown that: endotoxin [Lipopolysaccharide, LPS] is the cause of G - One of the most important causes of bacterial sepsis and septic shock, LPS and the endotoxemia it causes are G - The main cause or initiating factor of bacterial sepsis and septic shock. Therefore, anti-endotoxin therapy plays an important ...

Claims

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to View More

Application Information

Patent Timeline
no application Login to View More
Patent Type & Authority Patents(China)
IPC IPC(8): C12N15/11C12N15/10C12N15/115
Inventor 杨清武吕凤林文爱清陈彩宇
Owner ARMY MEDICAL UNIV
Features
  • R&D
  • Intellectual Property
  • Life Sciences
  • Materials
  • Tech Scout
Why Patsnap Eureka
  • Unparalleled Data Quality
  • Higher Quality Content
  • 60% Fewer Hallucinations
Social media
Patsnap Eureka Blog
Learn More