HLA (Human Leukocyte Antigen)-A*0201 limitation CTL (Cytotoxic T Lymphocyte) epitope of zinc translocator and application thereof
A technology of HLA-A and zinc transporter is applied in the application field of the CTL epitope to achieve the effects of efficient killing ability and good development and application prospects
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[0016] In order to make the purpose, technical solution and advantages of the present invention clearer, the present invention will be further described in detail below in conjunction with the accompanying drawings.
[0017] 1. Prediction of HLA-A of ZnT8 * 0201 restricted CTL epitope
[0018] According to the amino acid sequence of human ZnT8 registered in Genbank (accession number is AAH28419), two different methods are combined: the method based on the binding strength of peptides to MHC-I molecules (including the two algorithms of BIMAS and SYFPEITHI) and the method based on proteasome cleavage specificity method (PAProc algorithm) to predict HLA-A of ZnT8 * 0201 restricted CTL epitope. Both algorithms, BIMAS and SYFPEITHI, are based on quantitative matrices to predict the binding strength of peptides to MHC-I molecules. The PAProc algorithm is based on a single-layer neural network algorithm and proteasome cleavage data from in vitro experiments. Its biggest advantage ...
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