Method for distinguishing green shell egg laying chicken and chicken green shell egg genotype as well as special fragment and primers
A green-shell laying hen, genotyping technology, applied in biochemical equipment and methods, DNA/RNA fragments, microbial determination/inspection, etc., can solve the problem of reaction failure, high cost, high template quality, high amplification conditions, etc. problems, to achieve the effect of low cost, simple operation and short identification time
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Embodiment 1
[0047] Example 1. Identification of green-shell laying hens and chicken green-shell egg genotype short fragments and multiple PCR primers
[0048] The green-shell egg trait of chickens is caused by a 4.2kb insertion sequence at the 5' end of the upstream SLC01B3 gene on chromosome 1 (the insertion sequence only appears in green-shell laying hens), so it is only necessary to detect whether the individual carries this insertion sequence. Individual phenotypes can be inferred.
[0049] After research, a short DNA molecule (425bp, partly 4.2kb insertion sequence) was found. The nucleotide sequence of the DNA molecule is sequence 4 in the sequence list; design relevant multiple PCR primers based on this DNA molecule; the specific design principle is as follows figure 1 As shown, two pairs of parallel lines represent two homologous chromosomes, the solid line represents the normal genome sequence, the dotted line represents the 4.2kb insertion sequence, and the arrows represent the ...
Embodiment 2
[0051] Embodiment 2, multiplex PCR distinguishes the genotype of producing green-shell layer hens and chicken green-shell eggs
[0052] 1. Using known genotype individuals to verify the accuracy of multiplex PCR to identify the genotype of green-shell laying hens
[0053] 1. Experimental animals
[0054] f 0 The generation individuals are 5 Dongxiang roosters (known genotype is O / O), 20 Dongxiang hens (known genotype is o / o), F 1 The generation individuals are 46 hens (known genotype is O / o) crossed from the above individuals. Dongxiang chickens were purchased from Jiangxi Dongxiang Hualu Breeding Poultry Co., Ltd.
[0055] 2. Extraction of DNA
[0056] respectively in F 0 and F 1 Take 1mL of blood from the subwing vein of the individual, anticoagulate with ACD (ACD: blood = 3:1), and extract the genomic DNA according to the standard phenol-imitation method:
[0057] (1) 30 μL anticoagulant blood + 300 μL PBS (1×, pH: 7.2) + 300 μL poultry blood lysate (120 g urea, 10 g...
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