Gene detection kit for guiding individualized medication of nitrendipine drug for reducing high blood pressure
A technology for nitrendipine and hypertension, applied in the field of oligonucleotide products, can solve the problems of unsuitable multi-SNP detection, limited detection objects, rising costs, etc., and achieve high-quality medical services, simple and convenient result analysis, and low cost. Effect
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Embodiment 1
[0079] Example 1: Primer Design and Synthesis
[0080] The surrounding sequences of the target SNP of this kit are queried in the db_SNP (build 132) and Hapmap (Rel 28, Phase II + III, Aug 10) databases, and these sequences are used to design multiplex PCR primers and single base extension primers.
[0081] The corresponding specific PCR primer core sequences (SEQ1a to SEQ2a) and specific extension primer core sequences (SEQ1b to SEQ2b) were designed for two polymorphic sites related to the discrimination of drug types, such as rs5186 and rs1137617. Two pairs of PCR primers and two extension primers (SEQ1a / b to SEQ2a / b) constitute an independent reaction system. In this independently performed reaction system, SEQ1a to SEQ2a participate in an independent multiplex PCR reaction, and SEQ1b to SEQ2b participate in a subsequent independent single base extension reaction.
[0082] Related primers were synthesized at Sangon Bioengineering (Shanghai) Co., Ltd.
Embodiment 2
[0083] Embodiment 2: sample DNA extraction
[0084] A total of 10 DNA samples were collected from ordinary Chinese people, marked as A1-A10. Among them, sample collection, DNA extraction, etc. were collected in accordance with the requirements of the instructions, and human venous blood was collected with EDTA anticoagulant tubes. According to the instructions, the collected blood should not be stored at 2-8°C for more than one week, and at -20°C for no more than one month, and can be transported in a curling box with ice or a foam box with ice. It is recommended to use fresh blood as much as possible. Genomic DNA extraction. Since this kit does not provide human genomic DNA extraction reagents, a commercial nucleic acid extraction kit (such as DNeasy Blood and Tissuekit from QIAGEN Company) was used to extract human genomic DNA from 200 μl whole blood of each patient, and the DNA was extracted using NanoDrop 2000 ( Thermo Company) quantified and normalized to 30ng / μl (A1-A1...
Embodiment 3
[0085] Embodiment three: biological experiment
[0086] Using ABI9700 type PCR instrument, according to the instruction manual, check the 2 polymorphic sites for identifying the drug type.
[0087] The components used in the kit for PCR, PCR product purification and single base extension are:
[0088] serial number component name main ingredient Specification 1 PCR Primer Mix PCR primers 24μL / tube x1 tube 2 PCR reaction solution Taq enzyme, dNTP 72μL / tube x1 tube 3 Enzyme digestion reaction solution SAP enzyme 48μL / tube x1 tube 4 Extension Primer Mix extension primer 24μL / tube x1 tube 5 Extension reaction solution Single base elongase, ddNTP 24μL / tube x1 tube 6 positive control Human Genomic DNA (30ng / μL) 10μL / tube x1 tube
[0089] The concentration of each primer pair is 500nmol / L.
[0090] According to the manual, the specific operation method is as follows:
[0091] 1. PCR amplification
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