Lamp primer and loop-mediated isothermal amplification detection kit for pet zoonotic chlamydial psittacosis
A Chlamydia psittacosis, ring-mediated isothermal technology, applied in the determination/inspection of microorganisms, recombinant DNA technology, biochemical equipment and methods, etc. The effect of simple operation and shortened experiment time
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Embodiment 1
[0045] The establishment of embodiment 1 Chlamydia psittaci LAMP detection method
[0046] 1) Design of Chlamydia psittaci LAMP primer set
[0047] The inventor downloaded the full-length Chlamydia psittaci ompA gene from the NCBI database. , EU159263.1, AB284062.1, AF269259.1, AF269268.1, AF269269.1, EF028916.1, EF197820.1, AB284058.1, AJ243525.1, AB284065.1, AB284064.1) including A-F, E / B. For 9 common genotypes such as M56 and WC, use the ClastW online comparison tool to select a 251bp conserved sequence, and use this sequence as a template to design a LAMP primer set online (see Table 1).
[0048] Table 1: Conserved templates and sequences of LAMP primer sets
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[0051] 2) Preparation of positive plasmid control products
[0052] Using the conserved sequence as a template, a 251bp gene fragment was synthesized, the synthetic gene fragment was connected to the pUC57 plasmid vector and transformed into Escherichia coli competent cells, the positive ...
Embodiment 2
[0062] Embodiment 2 Chlamydia psittaci LAMP detection method and traditional PCR method comparative experiment
[0063] The accuracy of the LAMP detection method is consistent with that of the PCR method, and the sensitivity is 100-1000 times higher than that of the PCR method.
[0064] 1) Comparison of the accuracy of the LAMP detection method for Chlamydia psittaci and the traditional PCR method
[0065] In September 2020, Chlamydia psittaci broke out in a carrier pigeon farm in Beijing, and 9 cases of sick pigeons were captured. One tracheal swab and one anal swab were collected from each sick pigeon, and a total of 18 samples were collected by PCR method and LAMP respectively. Methods 18 samples were tested to compare the accuracy of the two methods. See Table 3 for sample collection information.
[0066] Table 3: Sample Collection Information
[0067] sample number Ankle number sample type sample number Ankle number sample type 1 6909 Trachea...
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