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Method For Detecting And Purifying Pancreatic Beta Cells

a pancreatic beta cell and purification technology, applied in the field of purification of pancreatic beta cells, can solve the problems of shortened lifespan, increased cardiovascular risk, and patients' adverse effects, and achieve the effect of improving treatment and diagnosis of diabetes

Inactive Publication Date: 2012-03-22
THE CLEVELAND CLINIC FOUND +1
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Benefits of technology

[0008]The invention is based, in part, on the discovery that a polypeptide, referred to herein as Betacam, is selectively expressed on the surface of pancreatic islet cells. Thus, in one aspect, the invention is directed to compositions comprising Betacam or that can be used to detect Betacam. In another aspect, the invention provides methods of detecting (e.g., non-invasively) pancre...

Problems solved by technology

The normal function of the pancreatic beta cell is to control blood glucose homeostasis, and in absence of such regulation several detrimental effects are observed in patients with the disease, even in the presence of intensive treatment.
Such long-term complications affect the function of the kidneys (nephropathy), eye degeneration (retinopathy), loss of extremities by amputation (vascular complications) and diabetes is furthermore associated with increased cardiovascular risk, and results in a shortened lifespan.
Consequently, a loss of such cells leads to insulin dependence.
Presently, there is no method by which beta cell mass can be assessed in a non-biased manner non-invasively in human subjects.
The amount of donor material reflecting on progressive disease development is therefore significantly limited, and kinetic studies on disease progression in an individual are impossible using this technology.
Following transplantation, there is generally no means to assess the viability and health of the grafted islet cells, as these are inaccessible in the recipient's liver vascular system.
There is no unbiased assessment of the actual viable islet cell mass that engrafts within the liver, and it cannot be followed.
However, in the best case, this only provides a read out of grafting efficiency; it is not able to accurately measure numbers / mass of viable grafted islet cells.

Method used

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  • Method For Detecting And Purifying Pancreatic Beta Cells
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  • Method For Detecting And Purifying Pancreatic Beta Cells

Examples

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example 1

Identification of Betacam as a Novel Cell Surface Molecule

[0178]In the following, a description of the amino acid sequence of the protein Betacam is provided. Homologous regions were easily detected for multiple species including human, pan troglodytes, canis familiaris, rat rattus, and gallus gallus, and several other species. Otherwise specified, the amino acid sequence numbering is in the following referring to that of mouse Betacam protein, isoform 1 [SEQ ID NO: 3], encoding a total of 463 amino acids.

[0179]In particular, the inventors named the gene locus in mouse, corresponding to Unigene Mm.206911, FIG. 1, Betacam. The encoded protein was henceforth named Betacam. Its NCBI gene ID is 101202. The current name of the gene as used by NCBI is “expressed sequence AI987662” (FIG. 1). The inventors name the gene locus LOC253012 in humans, its GeneID: 253012 (FIG. 2 and FIG. 3), and its corresponding to UniGene Hs.443169, Betacam as well. The inventors name the protein encoded by the...

example 2

Expression of Betacam on Pancreatic Insulin-Producing Beta Cells

[0192]Initial assessment of expression of Betacam using genomics-type data was performed (FIG. 16). Genomics data were either publicly available, or produced for the purpose of finding novel genes displaying beta-cell expression. To obtain data on expression, RNA was isolated for select tissues, or cell types. The resulting RNA was subjected to cDNA conversion, whereafter hybridization to select commercial genomics expression DNA-chips were performed. Such chips included types of Affymetrix, and Illumina commercial-type platforms. Expression data were normalized in software packages suitable for the need, including the GeneSpring analysis program and the Partek analysis program. Normalization of DNA chip scans were performed using the MAS5.0 algorithm for Affymetrix-type datasets, whereas Illumina type data sets were normalized using “average” normalization within the vendor-supplied program “BeadStudio”. Affymetrix sca...

example 3

Structural Prediction Analysis of the Folding Conformation of the Extra-Cellular Region of Betacam

[0201]The data on the predicted structural fold of the Betacam extracellular portion was based on a method known as “threading”, and provides to those skilled in the art, a confidence level basis for understanding an unknown 3-dimensional fold, as judged through comparisons to other similarly folding proteins. The resource that was applied to obtain these results is known as “Phyre”, provide by the imperial College, U. K. (http: / / www.sbg.bio.ic.ac.uk / phyre / ). Uploading the amino acid sequence for mouse Betacam, the Phyre resource first performed a Psi-blast homology detection algorithm analysis using sequence identities for proteins for which a 3-dimensional structure has been solved, and is publicly available. Hits passing a minimal threshold were used for a “threading analysis” in which the novel protein sequence, in this case that of Betacam, was threaded through the fold libraries r...

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Abstract

The invention is based, in part, on the discovery that a polypeptide, referred to herein as Betacam, is selectively expressed on the surface of pancreatic islet cells, Thus, in one aspect, the invention is directed to compositions comprising Betacam or that can be used to detect Betacam. In another aspect, the invention provides methods of detecting (e.g., non-invasively) pancreatic beta cells from a mammalian cell source. Another aspect of the invention is directed to cellular purification of pancreatic beta cells from a heterogeneous cell source of multiple kinds. In another aspect, the invention provides methods of identifying agents that modulate activity of Betacam-In yet another aspect, the invention provides for improved treatment and diagnosis of diabetes.

Description

RELATED APPLICATION(S)[0001]This application claims the benefit of U.S. Provisional Application No. 61 / 198,763, filed on Nov. 7, 2008. The entire teachings of the above application(s) are incorporated herein by reference.BACKGROUND OF THE INVENTION[0002]Diabetes is a devastating disease that is caused by either the complete destruction of the pancreatic beta-cell (type I, or juvenile diabetes) or the deterioration of the function of such cells (Type II, or adult diabetes). Many people suffer from the diseases, with an estimated number in this country of app. 17.5 million diagnosed. As a percentage of the total population, this figure is rising. Associated health costs as outlined by the American Diabetes Association are estimated at $174 billion, of which one third is accredited to a loss of national productivity. The average cost for health care expenses for a diabetic person is 2.3 fold higher than in absence of diabetes, and is currently set at $11,744 / year.[0003]Temporal curing ...

Claims

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Application Information

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IPC IPC(8): G01N33/566C12Q1/02C07K16/28C12N5/071C07H21/04C07K14/705
CPCC07K14/705C07K14/70503G01N2800/042C07K2319/30G01N33/6893C07K16/2803C07K16/28C12N5/0676G01N33/5032G01N33/507G01N33/56966G01N2333/705
Inventor JENSEN, JANHUTTON, JOHNQU, XIAOLINGDAVIDSON, HOWARD
Owner THE CLEVELAND CLINIC FOUND
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