Method For Detecting And Purifying Pancreatic Beta Cells
a pancreatic beta cell and purification technology, applied in the field of purification of pancreatic beta cells, can solve the problems of shortened lifespan, increased cardiovascular risk, and patients' adverse effects, and achieve the effect of improving treatment and diagnosis of diabetes
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example 1
Identification of Betacam as a Novel Cell Surface Molecule
[0178]In the following, a description of the amino acid sequence of the protein Betacam is provided. Homologous regions were easily detected for multiple species including human, pan troglodytes, canis familiaris, rat rattus, and gallus gallus, and several other species. Otherwise specified, the amino acid sequence numbering is in the following referring to that of mouse Betacam protein, isoform 1 [SEQ ID NO: 3], encoding a total of 463 amino acids.
[0179]In particular, the inventors named the gene locus in mouse, corresponding to Unigene Mm.206911, FIG. 1, Betacam. The encoded protein was henceforth named Betacam. Its NCBI gene ID is 101202. The current name of the gene as used by NCBI is “expressed sequence AI987662” (FIG. 1). The inventors name the gene locus LOC253012 in humans, its GeneID: 253012 (FIG. 2 and FIG. 3), and its corresponding to UniGene Hs.443169, Betacam as well. The inventors name the protein encoded by the...
example 2
Expression of Betacam on Pancreatic Insulin-Producing Beta Cells
[0192]Initial assessment of expression of Betacam using genomics-type data was performed (FIG. 16). Genomics data were either publicly available, or produced for the purpose of finding novel genes displaying beta-cell expression. To obtain data on expression, RNA was isolated for select tissues, or cell types. The resulting RNA was subjected to cDNA conversion, whereafter hybridization to select commercial genomics expression DNA-chips were performed. Such chips included types of Affymetrix, and Illumina commercial-type platforms. Expression data were normalized in software packages suitable for the need, including the GeneSpring analysis program and the Partek analysis program. Normalization of DNA chip scans were performed using the MAS5.0 algorithm for Affymetrix-type datasets, whereas Illumina type data sets were normalized using “average” normalization within the vendor-supplied program “BeadStudio”. Affymetrix sca...
example 3
Structural Prediction Analysis of the Folding Conformation of the Extra-Cellular Region of Betacam
[0201]The data on the predicted structural fold of the Betacam extracellular portion was based on a method known as “threading”, and provides to those skilled in the art, a confidence level basis for understanding an unknown 3-dimensional fold, as judged through comparisons to other similarly folding proteins. The resource that was applied to obtain these results is known as “Phyre”, provide by the imperial College, U. K. (http: / / www.sbg.bio.ic.ac.uk / phyre / ). Uploading the amino acid sequence for mouse Betacam, the Phyre resource first performed a Psi-blast homology detection algorithm analysis using sequence identities for proteins for which a 3-dimensional structure has been solved, and is publicly available. Hits passing a minimal threshold were used for a “threading analysis” in which the novel protein sequence, in this case that of Betacam, was threaded through the fold libraries r...
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