Kit for detecting eight respiratory pathogens including novel coronavirus and application thereof
A pathogen detection and respiratory technology, applied in the field of 8 respiratory pathogen detection kits including the new coronavirus, can solve the problem of not including the new coronavirus detection target, and achieve a variety of virus qualitative types, high specificity and good specificity Effect
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Embodiment 1
[0037] Example 1: Selection of target sequence and design of primer probe
[0038] For the selection of target sequences, the 2019 novel coronavirus (SARS-CoV-2) selects commonly used ORF1ab and N genes as its detection targets. Influenza A virus (InfluenzaA), influenza A virus H1N1 (2009) (InfluenzaAH1N12009), influenza A virus H3N2 (InfluenzaAH3N2) were designed with general primers and probes, and the widely used hemagglutinin gene was selected to design primers and probes. Influenza B virus selects the M protein gene. For adenovirus (HAdv), 104 subtypes have been found so far (http: / / hadvwg.gmu.edu / ), among which the human adenoviruses associated with respiratory diseases mainly include subgenus B (HAdV-3, 7, 11 , 14, 16, 21, 50, 55), C subgenus (HAdV-1, 2, 5, 6, 57) and E subgenus (HAdV-4) (see: Technical Guidelines for the Prevention and Control of Human Adenovirus Respiratory Tract Infection (2019 edition)), the design of the primers and probes of this kit is mainly b...
Embodiment 2
[0041] Embodiment 2: Pseudovirus synthesis and evaluation
[0042] Synthesize the target gene fragments of eight respiratory pathogens such as the new crown by artificial synthesis, then construct the MS2 expression vector, conduct induced expression, after assembly and purification, conduct concentration and purity identification, and submit the pseudovirus synthesis to Xiamen Zhishan Biotechnology Co., Ltd. for synthesis .
[0043] The concentration of the pseudovirus is verified after synthesis, and its concentration is not lower than 10 10 copies / mL, the amount of residual DNA is less than 100copies / mL.
Embodiment 3
[0044] Example 3: Establishment of a quadruple compound amplification system
[0045] Choose the RT-qPCR Mix of Wuxi Zhongde Meilian Biotechnology Co., Ltd. to evaluate the performance (specificity and sensitivity) of the eight pathogen detection primers designed and synthesized above, including the new crown, and select the best-performing primers for subsequent compound primer systems The construction of composite primer construction template selects the above-mentioned synthetic pseudovirus.
[0046] After completing the above single amplification performance evaluation, select primers and probes of different pathogens that do not interact with each other for combined amplification, determine the best pathogen combination or the best primer-probe combination, in order to achieve the best multiple amplification conditions ( That is, the single amplification performance is consistent with the performance under the multiplex amplification), and then the construction of the com...
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